Home
last modified time | relevance | path

Searched refs:rateCount (Results 1 – 13 of 13) sorted by relevance

/dports/biology/hyphy/hyphy-2.5.33/res/TemplateBatchFiles/
H A DGateauxMR.bf21 rateCount = Columns (vars)+2;
55 …ecuteCommands ("global S_"+(rateCount-1)+"=0.5; global NS_"+(rateCount-1)+"=0.5;global P_"+(rateCo…
57 …teCommands("Model MG94MODEL_"+(rateCount-1)+"= (rate_matrix_"+(rateCount-1)+",vectorOfFrequencies,…
87 ps = {rateCount,1};
122 freqStrMatrix[rateCount-1] = freqStrMatrix[rateCount-2]+"(1-P_"+(rateCount-1)+")";
123 freqStrMatrix[rateCount-2] = freqStrMatrix[rateCount-2]+"P_"+(rateCount-1);
135 if (rateCount>2)
137 ExecuteCommands ("P_"+(rateCount-1)+"=1-freqValueMatrix[rateCount-1]/runningTerm;");
145 for (mi=0; mi<rateCount; mi=mi+1)
297 ExecuteCommands ("S_"+(rateCount-1)+"=bestAlpha;NS_"+(rateCount-1)+"=bestBeta;");
[all …]
H A DGateaux.bf16 rateCount = Columns (vars)+2;
63 …ecuteCommands ("global S_"+(rateCount-1)+"=0.5; global NS_"+(rateCount-1)+"=0.5;global P_"+(rateCo…
64 …pulateModelMatrix(\"rate_matrix_"+(rateCount-1)+"\",observedFreq,\"S_\"+(rateCount-1)+\"/c_scale\"…
65 …teCommands("Model MG94MODEL_"+(rateCount-1)+"= (rate_matrix_"+(rateCount-1)+",vectorOfFrequencies,…
91 ps = {rateCount,1};
126 freqStrMatrix[rateCount-1] = freqStrMatrix[rateCount-2]+"(1-P_"+(rateCount-1)+")";
127 freqStrMatrix[rateCount-2] = freqStrMatrix[rateCount-2]+"P_"+(rateCount-1);
139 if (rateCount>2)
141 ExecuteCommands ("P_"+(rateCount-1)+"=1-freqValueMatrix[rateCount-1]/runningTerm;");
301 ExecuteCommands ("S_"+(rateCount-1)+"=bestAlpha;NS_"+(rateCount-1)+"=bestBeta;");
[all …]
H A DCodonBivariateRateProcessor.bf82 rateCount = Columns (vars)+1;
90 ps = {rateCount,1};
91 rateInfo = {rateCount,4};
94 for (mi = 0; mi < rateCount-1; mi=mi+1)
99 for (mi = 0; mi < rateCount; mi=mi+1)
107 for (mi=0; mi<rateCount-1; mi=mi+1)
135 site_count = Columns (cm)/rateCount;
136 posteriorProbs = {site_count, rateCount};
137 columnHeaders = {1,rateCount};
337 logRates = {rateCount,3};
[all …]
/dports/biology/hyphy/hyphy-2.5.33/Examples/Categories/
H A Ddefinitions.bf89 fscanf (stdin,"Number",rateCount);
91 if (rateCount<=1)
99 multiplierMatrix = {rateCount,1};
103 for (k=0; k<rateCount; k=k+1)
113 category catVar = (rateCount,EQUAL,MEAN, ,multiplierMatrix, 0, 1e25);
206 fscanf (stdin,"Number",rateCount);
208 if (rateCount<=1)
217 rateMatrix = {rateCount,1};
218 for (k=0; k<rateCount; k=k+1)
222 probMatrix = {rateCount,1};
[all …]
/dports/net-mgmt/aircrack-ng/aircrack-ng-1.5.2/patches/
H A Dmadwifi-old-r1417.patch14 if (index >= 0 && index < rt->rateCount) {
20 + if (index >= 0 && index < rt->rateCount) {
/dports/net-mgmt/aircrack-ng/aircrack-ng-1.5.2/patches/old/
H A Dmadwifi-cvs-20050814.patch19 + if (index >= 0 && index < rt->rateCount) {
H A Dmadwifi-cvs-20051025.patch32 + if (index >= 0 && index < rt->rateCount) {
H A Dmadwifi-cvs-20050707.patch98 + for (i = 0; i < rt->rateCount; i++) {
/dports/audio/ardour6/Ardour-6.8.0/tools/omf/
H A Domftool.cc664 int rateCount; in create_xml() local
667 …ERE object = %s AND property = 'OMFI:MSLT:EditRate' LIMIT 1", tracks[i]), &rate, &rateCount, 0, 0); in create_xml()
669 if (rateCount > 0) { in create_xml()
/dports/misc/rump/buildrump.sh-b914579/src/sys/external/isc/atheros_hal/dist/
H A Dah.h496 int rateCount; /* NB: for proper padding */ member
H A Dah.c413 for (i = 0; i < rt->rateCount; i++) { in ath_hal_setupratetable()
/dports/misc/rump/buildrump.sh-b914579/src/sys/dev/ic/
H A Dath.c3540 for (i = 0; i < rt->rateCount; i++) in ath_tx_findrix()
5034 if (rt->rateCount > IEEE80211_RATE_MAXSIZE) { in rate_setup()
5037 __func__, rt->rateCount, IEEE80211_RATE_MAXSIZE); in rate_setup()
5040 maxrates = rt->rateCount; in rate_setup()
5114 for (i = 0; i < rt->rateCount; i++) in ath_setcurmode()
/dports/misc/rump/buildrump.sh-b914579/src/sys/external/isc/atheros_hal/dist/ar5212/
H A Dar5212_reset.c2594 for (i = 0; i < rt->rateCount; ++i) in ar5212SetRateDurationTable()
2603 for (i = 0; i < rt->rateCount; ++i) { in ar5212SetRateDurationTable()