Searched refs:readsQTrimmedT (Results 1 – 4 of 4) sorted by relevance
518 long readsQTrimmedT=0; in process() local728 readsQTrimmedT+=(x>0 ? 1 : 0); in process()733 readsQTrimmedT+=(x>0 ? 1 : 0); in process()942 readsQTrimmedT+=(x>0 ? 1 : 0); in process()947 readsQTrimmedT+=(x>0 ? 1 : 0); in process()1218 …m.println("QTrimmed: \t"+readsQTrimmedT+" reads ("+String.format(Locale.ROOT, "%.2f"… in process()
1531 readsQTrimmed+=pt.readsQTrimmedT;1986 readsQTrimmedT+=(x>0 ? 1 : 0);1998 readsQTrimmedT+=(x>0 ? 1 : 0);2011 readsQTrimmedT+=r1.pairCount();2748 private long readsQTrimmedT=0;
1626 readsQTrimmed+=pt.readsQTrimmedT; in spawnProcessThreads()2288 readsQTrimmedT+=(x>0 ? 1 : 0); in run()2297 readsQTrimmedT+=(x>0 ? 1 : 0); in run()3265 private long readsQTrimmedT=0; field in BBDuk2.ProcessThread
1988 readsQTrimmed+=pt.readsQTrimmedT; in spawnProcessThreads()2976 readsQTrimmedT+=(x>0 ? 1 : 0); in run()2983 readsQTrimmedT+=(x>0 ? 1 : 0); in run()4278 long readsQTrimmedT=0; field in BBDuk.ProcessThread