Searched refs:removeCycles (Results 1 – 6 of 6) sorted by relevance
| /dports/biology/abyss/abyss-2.3.1/Scaffold/ |
| H A D | scaffold.cc | 263 removeCycles(Graph& g) in removeCycles() function
739 removeCycles(g); in scaffold()
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| /dports/java/openjdk8/jdk8u-jdk8u312-b07.1/hotspot/src/share/tools/IdealGraphVisualizer/HierarchicalLayout/src/com/sun/hotspot/igv/hierarchicallayout/ |
| H A D | OldHierarchicalLayoutManager.java | 442 removeCycles(rootNodes); in doLayout()
1110 private void removeCycles(Set<Node<NodeData, EdgeData>> rootNodes) { in removeCycles() method in OldHierarchicalLayoutManager
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| /dports/java/openjdk8-jre/jdk8u-jdk8u312-b07.1/hotspot/src/share/tools/IdealGraphVisualizer/HierarchicalLayout/src/com/sun/hotspot/igv/hierarchicallayout/ |
| H A D | OldHierarchicalLayoutManager.java | 442 removeCycles(rootNodes); in doLayout()
1110 private void removeCycles(Set<Node<NodeData, EdgeData>> rootNodes) { in removeCycles() method in OldHierarchicalLayoutManager
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| /dports/biology/bbmap/bbmap/current/jgi/ |
| H A D | DedupeProtein.java | 209 removeCycles=Parse.parseBoolean(b); in DedupeProtein()
343 if(maxSpanningTree){removeCycles=fixMultiJoins=false;} in DedupeProtein()
1148 alct.add(new ClusterThread(fixMultiJoins, removeCycles, fixOffsetContradictions, in processClusters()
1946 cycleOverlaps=findCycles(cluster, removeCycles); in run()
4801 boolean removeCycles=true; field in DedupeProtein
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| H A D | Dedupe.java | 238 removeCycles=Parse.parseBoolean(b); in Dedupe()
376 if(maxSpanningTree){removeCycles=fixMultiJoins=false;} in Dedupe()
1181 …alct.add(new ClusterThread(fixMultiJoins, canonicizeClusters, removeCycles, fixCanonContradictions… in processClusters()
2068 cycleOverlaps=findCycles(cluster, removeCycles);
5666 boolean removeCycles=true;
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| H A D | Dedupe2.java | 213 removeCycles=Parse.parseBoolean(b); in Dedupe2()
346 if(maxSpanningTree){removeCycles=fixMultiJoins=false;} in Dedupe2()
1145 …alct.add(new ClusterThread(fixMultiJoins, canonicizeClusters, removeCycles, fixCanonContradictions… in processClusters()
1994 cycleOverlaps=findCycles(cluster, removeCycles);
5487 boolean removeCycles=true;
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