Searched refs:rootlength (Results 1 – 3 of 3) sorted by relevance
/dports/biology/gmap/gmap-2020-09-12/src/ |
H A D | indexdb.c | 445 int rootlength, patternlength; in Indexdb_get_filenames_no_compression() local 620 rootlength = q - base_filename; in Indexdb_get_filenames_no_compression() 632 strncpy(positions_high_basename_ptr,base_filename,rootlength); in Indexdb_get_filenames_no_compression() 636 strncpy(positions_basename_ptr,base_filename,rootlength); in Indexdb_get_filenames_no_compression() 726 int rootlength, patternlength; in Indexdb_get_filenames_bitpack() local 1013 rootlength = q - base_filename; in Indexdb_get_filenames_bitpack() 1021 strncpy(offsetsmeta_basename_ptr,base_filename,rootlength); in Indexdb_get_filenames_bitpack() 1045 strncpy(offsetspages_basename_ptr,base_filename,rootlength); in Indexdb_get_filenames_bitpack() 1066 strncpy(positions_basename_ptr,base_filename,rootlength); in Indexdb_get_filenames_bitpack() 1075 …strncpy(&(positions_high_basename_ptr[rootlength-BASE_KMER_SAMPLING]),&(base_filename[rootlength-B… in Indexdb_get_filenames_bitpack() [all …]
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/dports/biology/fluctuate/fluctuate1.4/ |
H A D | nu_constants.h | 33 #define rootlength 10000 /* length of root branch must be much macro
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H A D | fluctuate.c | 244 if (t->age >= curtree->root->tyme) return(rootlength); in howlong() 1481 p->back->tyme = rootlength; in orient() 1532 t->age = t->eventnode->tyme + rootlength; in initbranchlist() 1960 p->next->next->length = rootlength; in treeread() 2045 p->length = rootlength; in constructtree() 2046 q->length = rootlength; in constructtree() 2050 p->tyme = rootlength + height; in constructtree()
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