| /dports/biology/bbmap/bbmap/current/bloom/ |
| H A D | BloomFilterWrapper.java | 318 final ConcurrentReadOutputStream rosu, rosm; in process()
328 rosu=ConcurrentReadOutputStream.getStream(ffout1, ffout2, qfout1, qfout2, buff, null, false); in process()
329 rosu.start(); //Start the stream in process()
330 }else{rosu=null;} in process()
347 spawnThreads(cris, rosu, rosm); in process()
354 errorState|=ReadWrite.closeStreams(cris, rosu, rosm); in process()
383 …ds(final ConcurrentReadInputStream cris, final ConcurrentReadOutputStream rosu, final ConcurrentRe…
393 alpt.add(new ProcessThread(cris, rosu, rosm, i));
444 rosu=rosu_;
527 if(rosu!=null){rosu.add(reads, ln.id);}
[all …]
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| /dports/biology/bbmap/bbmap/current/jgi/ |
| H A D | DemuxByName2.java | 464 final ConcurrentReadOutputStream rosu=makeUnmatchedOutputStream(); in process() local
467 processInner(cris, mcros, rosu); in process()
471 cleanup(cris, mcros, rosu); in process()
536 final ConcurrentReadOutputStream rosu; in makeUnmatchedOutputStream() local
543 rosu=ConcurrentReadOutputStream.getStream(ffout1, ffout2, null, null, buff, null, true); in makeUnmatchedOutputStream()
544 rosu.start(); in makeUnmatchedOutputStream()
546 rosu=null; in makeUnmatchedOutputStream()
549 return rosu; in makeUnmatchedOutputStream()
597 if(rosu!=null){rosu.add(unmatched, ln.id);}//Send unmatched reads to rosu in processInner()
630 mcros.dumpResidual(rosu); in cleanup()
[all …]
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| H A D | DemuxByName.java | 373 final ConcurrentReadOutputStream rosu; in process() local
379 rosu=ConcurrentReadOutputStream.getStream(ffout1, ffout2, null, null, buff, null, true); in process()
380 rosu.start(); in process()
382 rosu=null; in process()
506 if(rosu!=null){rosu.add(unmatched, ln.id);} in process()
|
| H A D | Seal.java | 1456 final ConcurrentReadOutputStream rosm, rosu;
1463 rosu.start();
1464 }else{rosu=null;}
1477 if(rosu!=null || rosm!=null || mcros!=null){
1494 if(rosu!=null){rosu.add(new ArrayList<Read>(1), ln.id);}
1502 ReadWrite.closeStreams(cris, rosu, rosm);
1556 errorState|=ReadWrite.closeStreams(cris, rosu, rosm);
1859 rosu=rosu_;
2164 if(rosu!=null){
2165 rosu.add(ulist, ln.id);
[all …]
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| H A D | KmerNormalize.java | 2801 rosu=rosu_; in ProcessThread()
2829 final ArrayList<Read> uncList=(rosu==null ? null : new ArrayList<Read>(Shared.bufferLen())); in normalizeInThread()
3164 …if(rosu!=null){ //Important to send all lists to output, even empty ones, to keep list IDs straigh… in normalizeInThread()
3166 rosu.add(uncList, ln.id); in normalizeInThread()
3342 assert(rosu==null) : "TODO - Uncorrectable fraction out not supported by countup."; in normalizeInThreadByCountup()
3428 private final ConcurrentReadOutputStream rosu; field in KmerNormalize.ProcessThread
|
| /dports/biology/bbmap/bbmap/current/stream/ |
| H A D | MultiCros2.java | 89 public long dumpResidual(ConcurrentReadOutputStream rosu){ in dumpResidual() argument
101 if(rosu!=null){rosu.add(b.list, 0);} in dumpResidual()
|
| H A D | MultiCros3.java | 103 public long dumpResidual(ConcurrentReadOutputStream rosu){ in dumpResidual() argument
113 if(rosu!=null){rosu.add(b.list, 0);} in dumpResidual()
|
| H A D | BufferedMultiCros.java | 97 public abstract long dumpResidual(ConcurrentReadOutputStream rosu); in dumpResidual() argument
|
| /dports/editors/libreoffice-sid/libreoffice-7.2.6.2/opt/libreoffice7.2/readmes/ |
| H A D | README_sid | 16 …si'ni hajora (lawishshaho daddaloho, gashshooteho, dagate gashshootiranna rosu horora) horonsi'ra …
|
| /dports/audio/lmms/lmms-1.2.2/plugins/zynaddsubfx/ |
| H A D | ChangeLog | 640 …put sa fac partea de aratare ca parametrii au fost schimbati (butonul "Apply" se coloreaza in rosu)
641 14 Iul 2004 - Butonul Apply la PADsynth se coloreaza in rosu cand se modifica ceva
657 …- Corectata inca o mica eroare care facea ca sa nu se coloreze butonul PAD_Synth Apply in rosu la …
|
| /dports/audio/lmms/lmms-1.2.2/plugins/zynaddsubfx/zynaddsubfx/ |
| H A D | ChangeLog | 640 …put sa fac partea de aratare ca parametrii au fost schimbati (butonul "Apply" se coloreaza in rosu)
641 14 Iul 2004 - Butonul Apply la PADsynth se coloreaza in rosu cand se modifica ceva
657 …- Corectata inca o mica eroare care facea ca sa nu se coloreze butonul PAD_Synth Apply in rosu la …
|
| /dports/databases/pgaccess/pgaccess-1.00.20140902/demo/ |
| H A D | demo.pga | 78 …r l left_ptr false none {} {}} {radio radio17 {182 300 302 320} {} {red , rosu , rouge} color red …
|
| /dports/textproc/scim-openvanilla/openvanilla-0.7.2.20070514/Modules/SharedData/ |
| H A D | jtcj.cin | 5294 rosu 呛
|
| /dports/textproc/openvanilla-framework/openvanilla-0.7.2.20070514/Modules/SharedData/ |
| H A D | jtcj.cin | 5294 rosu 呛
|
| /dports/chinese/wenju/wenju-1.6/src/tim/tables/ |
| H A D | cj5-s.tim | 5228 rosu=呛
|
| /dports/misc/xfce4-weather-plugin/xfce4-weather-plugin-0.11.0/po/ |
| H A D | tr.po | 821 msgstr "Bu model, özellikle, bu kıtanın iklimi için uyarlanmış Meteoroloji Avustralya Bürosu tarafı…
|
| H A D | hr.po | 923 …ičina vodene pare u zraku. Ona povećava vjerojatnost za padaline, maglu i rosu. Dok je apsolutna v…
|
| /dports/astro/marble/marble-21.12.3/po/tr/ |
| H A D | marble.po | 1774 #~ msgstr "Döviz bürosu"
|
| /dports/audio/easytag/easytag-2.4.3/po/ |
| H A D | ro.po | 7110 #~ "rosu si gri (ex. pentru fisiere modificate si nesalvate)."
|
| /dports/mail/thunderbird-dictionaries/dictionaries/spell-ro.xpi/ |
| H A D | ro.dic | 35093 rosu
35094 rosu/L
|
| /dports/chinese/rime-quick/rime-quick-3fe5911ba608cb2df1b6301b76ad1573bd482a76/ |
| H A D | quick5.dict.yaml | 16218 呛 rosu
|
| /dports/chinese/brise/brise-brise-0.35/supplement/ |
| H A D | quick5.dict.yaml | 16218 呛 rosu
|
| /dports/games/wesnoth/wesnoth-1.14.17/po/wesnoth/ |
| H A D | ro.po | 8453 #~ msgstr "rosu daca si-a folosit toate PM aceasta runda, sau"
|
| /dports/chinese/scim-tables/scim-tables-0.5.10/tables/zh/ |
| H A D | CangJie5.txt.in | 16717 rosu 呛 10
|
| /dports/textproc/scim-table-imengine/scim-tables-0.5.10/tables/zh/ |
| H A D | CangJie5.txt.in | 16717 rosu 呛 10
|