Searched refs:s_snp (Results 1 – 1 of 1) sorted by relevance
| /dports/biology/gemma/GEMMA-0.98.3/src/ |
| H A D | vc.cpp | 1390 double s_pve = 0, s_snp = 0; in CalcVCss() local
1393 s_snp += gsl_vector_get(s_vec, i); in CalcVCss()
1396 gsl_vector_scale(enrich, s_snp / s_pve); in CalcVCss()
1406 gsl_matrix_set(tmp_mat, i, j, (1 - d) / d1 * s_snp / s_pve); in CalcVCss()
1408 gsl_matrix_set(tmp_mat, i, j, -1 * d / d1 * s_snp / s_pve); in CalcVCss()
2752 double d, s0, s1, s, s_pve, s_snp; in CalcCIss() local
2773 s_snp = 0; in CalcCIss()
2776 s_snp += gsl_vector_get(s_vec, i); in CalcCIss()
2863 v_enrich.push_back(v_pve[i] / gsl_vector_get(s_vec, i) * s_snp / s_pve); in CalcCIss()
2896 gsl_matrix_set(tmp_mat, i, j, (1 - d) / d1 * s_snp / s_pve); in CalcCIss()
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