Searched refs:setGWASnps (Results 1 – 5 of 5) sorted by relevance
87 set<string> setGWASnps; // Record SNP information. variable
327 set<string> setGWASnps; // Set of snps for GWA (-gwasnps and LOCO) variable
84 setGWASnps = cPar.setGWASnps; in CopyFromParam()186 bool process_gwasnps = setGWASnps.size(); in WriteFiles()203 if (process_gwasnps && setGWASnps.count(snp) == 0) in WriteFiles()
498 LOCO_set_Snps(setKSnps, setGWASnps, mapRS2chr, loco); in ReadFiles()1130 if (setGWASnps.size()) in CheckData()1131 cout << "## number of SNPS for GWAS = " << setw(8) << setGWASnps.size() << endl; in CheckData()
2793 &Y_col.vector, cPar.setGWASnps); in BatchRun()2805 &Y_col.vector, cPar.setGWASnps); in BatchRun()