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Searched refs:sex_file (Results 1 – 5 of 5) sorted by relevance

/dports/biology/gcta/gcta_1.26.0_src/
H A Dbivar_reml.cpp15 …ring covar_file, string keep_indi_file, string remove_indi_file, string sex_file, int mphen, int m… in fit_bivar_reml() argument
60 if (!sex_file.empty()) update_sex(sex_file); in fit_bivar_reml()
178 if (!sex_file.empty()) update_sex(sex_file); in fit_bivar_reml()
H A Dgcta.h95 void update_sex(string sex_file);
101 …void save_grm(string grm_file, string keep_indi_file, string remove_indi_file, string sex_file, do…
109 … string GE_file, string keep_indi_file, string remove_indi_file, string sex_file, int mphen, doubl…
120 …ring covar_file, string keep_indi_file, string remove_indi_file, string sex_file, int mphen, int m…
228 …string grm_file, string keep_indi_file, string remove_indi_file, string sex_file, double grm_cutof…
H A Dgrm.cpp480 …string grm_file, string keep_indi_file, string remove_indi_file, string sex_file, double grm_cutof… in manipulate_grm() argument
491 if (!sex_file.empty()) update_sex(sex_file); in manipulate_grm()
509 …string grm_file, string keep_indi_file, string remove_indi_file, string sex_file, double grm_cutof… in save_grm() argument
511 …manipulate_grm(grm_file, keep_indi_file, remove_indi_file, sex_file, grm_cutoff, adj_grm_fac, dosa… in save_grm()
H A Ddata.cpp1158 void gcta::update_sex(string sex_file) { in update_sex() argument
1159 ifstream isex(sex_file.c_str()); in update_sex()
1160 if (!isex) throw ("Error: can not open the file [" + sex_file + "] to read."); in update_sex()
1163 cout << "Reading sex information from [" + sex_file + "]." << endl; in update_sex()
1173 …Error: unrecognized sex code: \"" + fid + " " + pid + " " + str_buf + "\" in [" + sex_file + "]."); in update_sex()
1188 …cout << "Sex information for " << icount << " individuals are update from [" + sex_file + "]." << … in update_sex()
H A Dest_hsq.cpp171 … string GE_file, string keep_indi_file, string remove_indi_file, string sex_file, int mphen, doubl… in fit_reml() argument
226 if (!sex_file.empty()) update_sex(sex_file); in fit_reml()
293 if (!sex_file.empty()) update_sex(sex_file); in fit_reml()