Searched refs:shape_sequence (Results 1 – 5 of 5) sorted by relevance
| /dports/biology/viennarna/ViennaRNA-2.4.18/src/bin/ |
| H A D | RNApvmin.c | 93 char *rec_id, *rec_sequence, **rec_rest, *shape_sequence; in main() local
230 shape_sequence = vrna_alloc(sizeof(char) * (length + 1)); in main()
233 if (vrna_file_SHAPE_read(args_info.inputs[0], length, -1, shape_sequence, shape_data)) { in main()
279 free(shape_sequence); in main()
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| /dports/biology/viennarna/ViennaRNA-2.4.18/interfaces/ |
| H A D | file_formats.i | 7 %apply std::string *OUTPUT { std::string *shape_sequence };
17 std::string *shape_sequence, in my_file_SHAPE_read() argument
25 *shape_sequence = std::string(seq); in my_file_SHAPE_read()
36 std::string *shape_sequence,
40 %clear std::string *shape_sequence;
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| /dports/biology/viennarna/ViennaRNA-2.4.18/interfaces/Perl/ |
| H A D | RNA_wrap.cpp | 4608 std::string *shape_sequence, in my_file_SHAPE_read() argument
4616 *shape_sequence = std::string(seq); in my_file_SHAPE_read()
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| /dports/biology/viennarna/ViennaRNA-2.4.18/interfaces/Python/ |
| H A D | RNA_wrap.cpp | 8873 std::string *shape_sequence, in my_file_SHAPE_read() argument
8881 *shape_sequence = std::string(seq); in my_file_SHAPE_read()
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| /dports/biology/viennarna/ViennaRNA-2.4.18/interfaces/Python3/ |
| H A D | RNA_wrap.cpp | 9017 std::string *shape_sequence, in my_file_SHAPE_read() argument
9025 *shape_sequence = std::string(seq); in my_file_SHAPE_read()
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