| /dports/biology/fasta3/fasta-36.3.8/src/ |
| H A D | drop_func.h | 66 int qr_flg, int shuff_flg, struct rstruct *rst,
|
| H A D | dropnsw.c | 294 int qr_flg, int shuff_flg, in do_work() argument
|
| H A D | dropnfa.c | 564 struct rstruct *rst, int *hoff, int shuff_flg, in do_fasta() argument
832 int qr_flg, int shuff_flg, struct rstruct *rst, in do_work() argument
849 do_fasta (aa0, n0, f_str->aa1x, n10, ppst, f_str, rst, &hoff, shuff_flg, s_info); in do_work()
851 do_fasta (aa0, n0, aa1, n1, ppst, f_str, rst, &hoff, shuff_flg, s_info); in do_work()
|
| H A D | dropnnw2.c | 539 int qr_flg, int shuff_flg, struct rstruct *rst, in do_work() argument
|
| H A D | dropgsw2.c | 700 int qr_flg, int shuff_flg, struct rstruct *rst, in do_work() argument
|
| H A D | dropfx2.c | 621 struct rstruct *rst, int *hoff, int shuff_flg, argument
970 int qr_flg, int shuff_flg, struct rstruct *rst, argument
1005 do_fastx (f_str->aa0x, n0, aa1, n1, f_str->aa0y, ppst, f_str, rst, &hoff, shuff_flg, s_info);
1007 do_fastx (aa0, n0, f_str->aa1x, n10, f_str->aa1y, ppst, f_str, rst, &hoff, shuff_flg, s_info);
|
| H A D | dropfz3.c | 788 struct rstruct *rst, int *hoff, int shuff_flg, argument
1065 int qr_flg, int shuff_flg, struct rstruct *rst, argument
1082 do_fastz (f_str->aa0x, n0, aa1, n1, f_str->aa0v, ppst, f_str, rst, &hoff, shuff_flg, s_info);
1108 do_fastz (aa0, n0, f_str->aa1x, n10, f_str->aa1v, ppst, f_str, rst, &hoff, shuff_flg, s_info);
|
| H A D | dropfx.c | 619 struct rstruct *rst, int *hoff, int shuff_flg, argument
968 int qr_flg, int shuff_flg, struct rstruct *rst, argument
1003 do_fastx (f_str->aa0x, n0, aa1, n1, f_str->aa0y, ppst, f_str, rst, &hoff, shuff_flg, s_info);
1005 do_fastx (aa0, n0, f_str->aa1x, n10, f_str->aa1y, ppst, f_str, rst, &hoff, shuff_flg, s_info);
|
| H A D | dropfz2.c | 788 struct rstruct *rst, int *hoff, int shuff_flg, argument
1065 int qr_flg, int shuff_flg, struct rstruct *rst, argument
1082 do_fastz (f_str->aa0x, n0, aa1, n1, f_str->aa0v, ppst, f_str, rst, &hoff, shuff_flg, s_info);
1108 do_fastz (aa0, n0, f_str->aa1x, n10, f_str->aa1v, ppst, f_str, rst, &hoff, shuff_flg, s_info);
|
| H A D | dropff2.c | 609 int qr_flg, int shuff_flg, struct rstruct *rst, in do_work() argument
|
| H A D | dropfs2.c | 846 int qr_flg, int shuff_flg, struct rstruct *rst, in do_work() argument
|
| /dports/biology/fasta3/fasta-36.3.8/doc/ |
| H A D | readme.v36 | 1576 now optimize all scores when shuff_flg is set.
|