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Searched refs:spExp (Results 1 – 5 of 5) sorted by relevance

/dports/science/cdk/cdk-cdk-2.3/tool/formula/src/test/java/org/openscience/cdk/formula/
H A DIsotopePatternManipulatorTest.java27 IsotopePattern spExp = new IsotopePattern(); in testNormalize_IsotopePattern() local
28 spExp.setMonoIsotope(new IsotopeContainer(156.07770, 2)); in testNormalize_IsotopePattern()
31 spExp.addIsotope(new IsotopeContainer(158.08135, 0.004)); in testNormalize_IsotopePattern()
32 spExp.setCharge(1); in testNormalize_IsotopePattern()
59 IsotopePattern spExp = new IsotopePattern(); in testSortByIntensity_IsotopePattern() local
61 spExp.addIsotope(new IsotopeContainer(156.07770, 1)); in testSortByIntensity_IsotopePattern()
64 spExp.setCharge(1); in testSortByIntensity_IsotopePattern()
90 IsotopePattern spExp = new IsotopePattern(); in testSortAndNormalizedByIntensity_IsotopePattern() local
95 spExp.setCharge(1); in testSortAndNormalizedByIntensity_IsotopePattern()
121 IsotopePattern spExp = new IsotopePattern(); in testSortByMass_IsotopePattern() local
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H A DIsotopePatternSimilarityTest.java68 IsotopePattern spExp = new IsotopePattern(); in testCompare_IsotopePattern_IsotopePattern() local
69 spExp.setMonoIsotope(new IsotopeContainer(156.07770, 1)); in testCompare_IsotopePattern_IsotopePattern()
70 spExp.addIsotope(new IsotopeContainer(157.07503, 0.0004)); in testCompare_IsotopePattern_IsotopePattern()
71 spExp.addIsotope(new IsotopeContainer(157.08059, 0.0003)); in testCompare_IsotopePattern_IsotopePattern()
72 spExp.addIsotope(new IsotopeContainer(158.08135, 0.002)); in testCompare_IsotopePattern_IsotopePattern()
78 double score = is.compare(spExp, patternIsoNormalize); in testCompare_IsotopePattern_IsotopePattern()
91 IsotopePattern spExp = new IsotopePattern(); in testSelectingMF() local
92 spExp.setCharge(1); in testSelectingMF()
125 IsotopePattern spExp = new IsotopePattern(); in testExperiment() local
129 spExp.setCharge(1.0); in testExperiment()
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H A DIsotopePatternTest.java148 IsotopePattern spExp = new IsotopePattern(); in testClone() local
149 spExp.setMonoIsotope(new IsotopeContainer(156.07770, 1)); in testClone()
150 spExp.addIsotope(new IsotopeContainer(157.07503, 0.0004)); in testClone()
151 spExp.addIsotope(new IsotopeContainer(157.08059, 0.0003)); in testClone()
152 spExp.addIsotope(new IsotopeContainer(158.08135, 0.002)); in testClone()
153 spExp.setCharge(1); in testClone()
155 IsotopePattern clone = (IsotopePattern) spExp.clone(); in testClone()
/dports/biology/hyphy/hyphy-2.5.33/src/core/
H A Dnexus.cpp881 long offSet = 0L, count, spExp = result.GetNames().lLength, sitesExp = 0; in ProcessNexusData() local
909 spExp = buffer.to_long(); in ProcessNexusData()
910 if(spExp<=0L) { in ProcessNexusData()
913 spExp = result.GetNames().lLength?result.GetNames().lLength:1; in ProcessNexusData()
1175 if (result.GetNames().lLength<spExp) { in ProcessNexusData()
1176 if (spExp>0 && buffer.empty ()) { in ProcessNexusData()
1198 if (loopIterations<spExp) { in ProcessNexusData()
1226 if (result.GetNames().lLength!=spExp) { in ProcessNexusData()
1227 … ReportWarning(_String ("Expected ")&spExp&" taxa, but found "&(long)result.GetNames().lLength); in ProcessNexusData()
1232 if (spExp && loopIterations%spExp) { in ProcessNexusData()
/dports/security/hs-cryptol/cryptol-2.11.0/_cabal_deps/deriving-compat-0.5.10/src/Text/Show/Deriving/
H A DInternal.hs536 Just (TwoNames spExp slExp) -> if sl then slExp else spExp