Searched refs:spExp (Results 1 – 5 of 5) sorted by relevance
/dports/science/cdk/cdk-cdk-2.3/tool/formula/src/test/java/org/openscience/cdk/formula/ |
H A D | IsotopePatternManipulatorTest.java | 27 IsotopePattern spExp = new IsotopePattern(); in testNormalize_IsotopePattern() local 28 spExp.setMonoIsotope(new IsotopeContainer(156.07770, 2)); in testNormalize_IsotopePattern() 31 spExp.addIsotope(new IsotopeContainer(158.08135, 0.004)); in testNormalize_IsotopePattern() 32 spExp.setCharge(1); in testNormalize_IsotopePattern() 59 IsotopePattern spExp = new IsotopePattern(); in testSortByIntensity_IsotopePattern() local 61 spExp.addIsotope(new IsotopeContainer(156.07770, 1)); in testSortByIntensity_IsotopePattern() 64 spExp.setCharge(1); in testSortByIntensity_IsotopePattern() 90 IsotopePattern spExp = new IsotopePattern(); in testSortAndNormalizedByIntensity_IsotopePattern() local 95 spExp.setCharge(1); in testSortAndNormalizedByIntensity_IsotopePattern() 121 IsotopePattern spExp = new IsotopePattern(); in testSortByMass_IsotopePattern() local [all …]
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H A D | IsotopePatternSimilarityTest.java | 68 IsotopePattern spExp = new IsotopePattern(); in testCompare_IsotopePattern_IsotopePattern() local 69 spExp.setMonoIsotope(new IsotopeContainer(156.07770, 1)); in testCompare_IsotopePattern_IsotopePattern() 70 spExp.addIsotope(new IsotopeContainer(157.07503, 0.0004)); in testCompare_IsotopePattern_IsotopePattern() 71 spExp.addIsotope(new IsotopeContainer(157.08059, 0.0003)); in testCompare_IsotopePattern_IsotopePattern() 72 spExp.addIsotope(new IsotopeContainer(158.08135, 0.002)); in testCompare_IsotopePattern_IsotopePattern() 78 double score = is.compare(spExp, patternIsoNormalize); in testCompare_IsotopePattern_IsotopePattern() 91 IsotopePattern spExp = new IsotopePattern(); in testSelectingMF() local 92 spExp.setCharge(1); in testSelectingMF() 125 IsotopePattern spExp = new IsotopePattern(); in testExperiment() local 129 spExp.setCharge(1.0); in testExperiment() [all …]
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H A D | IsotopePatternTest.java | 148 IsotopePattern spExp = new IsotopePattern(); in testClone() local 149 spExp.setMonoIsotope(new IsotopeContainer(156.07770, 1)); in testClone() 150 spExp.addIsotope(new IsotopeContainer(157.07503, 0.0004)); in testClone() 151 spExp.addIsotope(new IsotopeContainer(157.08059, 0.0003)); in testClone() 152 spExp.addIsotope(new IsotopeContainer(158.08135, 0.002)); in testClone() 153 spExp.setCharge(1); in testClone() 155 IsotopePattern clone = (IsotopePattern) spExp.clone(); in testClone()
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/dports/biology/hyphy/hyphy-2.5.33/src/core/ |
H A D | nexus.cpp | 881 long offSet = 0L, count, spExp = result.GetNames().lLength, sitesExp = 0; in ProcessNexusData() local 909 spExp = buffer.to_long(); in ProcessNexusData() 910 if(spExp<=0L) { in ProcessNexusData() 913 spExp = result.GetNames().lLength?result.GetNames().lLength:1; in ProcessNexusData() 1175 if (result.GetNames().lLength<spExp) { in ProcessNexusData() 1176 if (spExp>0 && buffer.empty ()) { in ProcessNexusData() 1198 if (loopIterations<spExp) { in ProcessNexusData() 1226 if (result.GetNames().lLength!=spExp) { in ProcessNexusData() 1227 … ReportWarning(_String ("Expected ")&spExp&" taxa, but found "&(long)result.GetNames().lLength); in ProcessNexusData() 1232 if (spExp && loopIterations%spExp) { in ProcessNexusData()
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/dports/security/hs-cryptol/cryptol-2.11.0/_cabal_deps/deriving-compat-0.5.10/src/Text/Show/Deriving/ |
H A D | Internal.hs | 536 Just (TwoNames spExp slExp) -> if sl then slExp else spExp
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