Searched refs:storeOrig (Results 1 – 8 of 8) sorted by relevance
5 …testClipOverlapReadName.sam --out results/testClipOverlapReadName.sam --storeOrig XC --noph 2> res…13 …Files/testClipOverlapCoord.sam --out results/testClipOverlapCoord.sam --storeOrig XC --noph 2> res…21 …ipOverlapCoordSecSup.sam --out results/testClipOverlapCoordSecSup.sam --storeOrig XC --noph 2> res…29 …/testClipOverlapCoord.sam --out results/testClipOverlapCoordUnmap.sam --storeOrig XC --noph --unma…37 …/testClipOverlapCoord.sam --out results/testClipOverlapCoordPool3.sam --storeOrig XC --poolSize 3 …49 …tClipOverlapCoord.sam --out results/testClipOverlapCoordPool3Clip.sam --storeOrig XC --poolSize 3 …61 …tClipOverlapCoord.sam --out results/testClipOverlapCoordPool0Clip.sam --storeOrig XC --poolSize 0 …73 …lipOverlapReadName.sam --out results/testClipOverlapReadNameStats.sam --storeOrig XC --noph 2> res…81 …/testClipOverlapCoord.sam --out results/testClipOverlapCoordStats.sam --storeOrig XC --noph 2> res…136 …tClipOverlapCoord.sam --out results/testClipOverlapCoordClipsOnly.sam --storeOrig XC --noph 2> res…[all …]
103 void CustomValueTracker::storeOrig() in storeOrig() function in CustomValueTracker106 globalProperties_.storeOrig(globalProperties_orig_); in storeOrig()
97 inline void storeOrig(class AssociativePointerArray &orig);98 inline void storeOrig(const char *_id,class AssociativePointerArray &orig);
130 void storeOrig();
366 void AssociativePointerArray<T>::storeOrig(AssociativePointerArray &orig) in storeOrig() function373 void AssociativePointerArray<T>::storeOrig(const char *_id, AssociativePointerArray &orig) in storeOrig() function
153 if(setupFlag) customValues_.storeOrig(); in refreshOwned()
277 globalProperties_.storeOrig(_id,globalProperties_orig_); in storeGlobalPropOrig()
90 String storeOrig = ""; in execute() local107 LONG_STRINGPARAMETER("storeOrig", &storeOrig) in execute()161 if((storeOrig.Length() != 0) && (storeOrig.Length() != 2)) in execute()185 if(storeOrig.Length() != 0) in execute()187 myOverlapHandler->storeOrigCigar(storeOrig); in execute()