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Searched refs:t_pos (Results 1 – 25 of 100) sorted by relevance

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/dports/biology/canu/canu-2.2/src/correction/
H A DfalconConsensus.C82 int32 t_pos = 0; in getConsensus() local
92 t_pos = tag->t_pos; in getConsensus()
93 msa[t_pos]->incrementCoverage(); in getConsensus()
97 …) with delta %d and current size is %d\n", j, i, t_pos, msa[t_pos]->getCoverage(), tag->delta, msa… in getConsensus()
105 msa[t_pos]->increaseDeltaGroup(tag->delta); in getConsensus()
123 assert(tag->delta < msa[t_pos]->deltaLen); in getConsensus()
124 align_tag_col_t &col = msa[t_pos]->delta[tag->delta]->base[base]; in getConsensus()
146 …pos %d base %d to be %c and length is %d\n", i, j, t_pos, base, tag->p_t_pos, tag->p_q_base, msa[t… in getConsensus()
H A DfalconConsensus-alignTag.H68 t_pos = 0x0fff; in alignTag()
79 int64 t_pos : 24; variable
112 tags[tagsLen].t_pos = tp; in setTag()
/dports/math/octave-forge-statistics/statistics-1.4.3/inst/
H A DConfusionMatrixChart.m489 t_pos(1) = find (Idx == (t_pos(1) + 1)) - 1;
492 t_pos = t_pos([2 1]) + 0.5; variable
496 t_pos(2) = find (Idx == (t_pos(2) + 1)) - 1;
499 t_pos = t_pos([2 1]) + 0.5; variable
503 t_pos(1) = find (Idx == (t_pos(1) + 1)) - 1;
504 t_pos(2) = find (Idx == (t_pos(2) + 1)) - 1;
507 t_pos = t_pos([2 1]) + 0.5; variable
609 idx = (t_pos(2) - cm_size - 1) * cm_size + t_pos(1) + 1;
613 idx = (t_pos(1) - cm_size - 1) * cm_size + t_pos(2) + 1;
617 idx = t_pos(2) * cm_size + t_pos(1) + 1;
[all …]
/dports/sysutils/heirloom/heirloom-070715/expand/
H A Dunexpand.c161 while (tp && col > tp->t_pos) in unexpand()
163 if (tp && col == tp->t_pos) { in unexpand()
168 while (col < tp->t_pos) in unexpand()
201 while (*tp && (*tp)->t_pos <= *cp) in spaces()
203 while (*sp && *tp && (*cp + *sp) >= (*tp)->t_pos) { in spaces()
208 *sp -= (*tp)->t_pos - *cp; in spaces()
209 *cp = (*tp)->t_pos; in spaces()
H A Dtablist.c76 tp->t_pos = n; in addtab()
79 if (tq->t_pos >= tp->t_pos) in addtab()
H A Dexpand.c129 while (tp && col > tp->t_pos) in expand()
131 if (tp && col == tp->t_pos) { in expand()
137 while (col < tp->t_pos) { in expand()
/dports/archivers/arj/arj-3.10.22/
H A Dexe_sear.c151 unsigned long t_pos; in fetch_block() local
160 t_pos=0L; in fetch_block()
163 fseek(stream, t_pos, SEEK_CUR); in fetch_block()
165 t_pos=fget_longword(stream); in fetch_block()
168 block_len=(int)min(sizeof(buf), t_pos); in fetch_block()
169 while(t_pos>0) in fetch_block()
176 t_pos-=(unsigned long)bytes_read; in fetch_block()
177 block_len=(int)min(sizeof(buf), t_pos); in fetch_block()
/dports/math/snns/SNNSv4.3/tools/sources/
H A Danalyze.c93 int t_pos; in ClassNo() local
96 t_pos = 0; in ClassNo()
101 t_pos = i ; in ClassNo()
106 return t_pos; in ClassNo()
130 int o_pos, t_pos, on, off, i; in F_402040() local
136 t_pos = 0 ; in F_402040()
148 t_pos = i ; in F_402040()
154 if (t_max > 0.0 && o_pos == t_pos) in F_402040()
191 o_pos = t_pos = 0; in F_WTA()
208 t_pos = i ; in F_WTA()
[all …]
/dports/editors/texmacs/TeXmacs-1.99.4-src/src/System/Language/
H A Dpackrat_parser.hpp45 void set_cursor (path t_pos);
75 inline packrat_parser (packrat_grammar gr, tree t, path t_pos= path ());
80 (packrat_grammar gr, tree t, path t_pos): in packrat_parser() argument
83 rep->set_cursor (t_pos); } in packrat_parser()
/dports/java/openjdk8/jdk8u-jdk8u312-b07.1/jaxp/src/com/sun/org/apache/bcel/internal/util/
H A DBCELFactory.java296 int t_pos = bh.getTarget().getPosition(); in visitBranchInstruction() local
299 if(pos > t_pos) { in visitBranchInstruction()
300 target = "ih_" + t_pos; in visitBranchInstruction()
328 int t_pos = bh.getTarget().getPosition(); in updateBranchTargets() local
330 _out.println(" " + name + ".setTarget(ih_" + t_pos + ");"); in updateBranchTargets()
336 t_pos = ihs[j].getPosition(); in updateBranchTargets()
339 ", ih_" + t_pos + ");"); in updateBranchTargets()
/dports/java/openjdk8-jre/jdk8u-jdk8u312-b07.1/jaxp/src/com/sun/org/apache/bcel/internal/util/
H A DBCELFactory.java296 int t_pos = bh.getTarget().getPosition(); in visitBranchInstruction() local
299 if(pos > t_pos) { in visitBranchInstruction()
300 target = "ih_" + t_pos; in visitBranchInstruction()
328 int t_pos = bh.getTarget().getPosition(); in updateBranchTargets() local
330 _out.println(" " + name + ".setTarget(ih_" + t_pos + ");"); in updateBranchTargets()
336 t_pos = ihs[j].getPosition(); in updateBranchTargets()
339 ", ih_" + t_pos + ");"); in updateBranchTargets()
/dports/biology/artemis/artemis-17.0.1-11-g3e43d27e/uk/ac/sanger/artemis/plot/
H A DPositionalAsymmetryAlgorithm.java97 float[] t_pos = {0,0,0}; in getValues() local
134 ++t_pos[frame]; in getValues()
166 t_chi += (Math.pow((Math.abs(exp_t-t_pos[frame])-0.5),2))/exp_t; in getValues()
168 t_chi += (Math.pow((exp_t-t_pos[frame]),2))/exp_t; in getValues()
/dports/games/arx-libertatis/arx-libertatis-1.1.2/src/graphics/data/
H A DFTLFormat.h279 SavedVec3 t_pos; member
294 a.t_pos = t_pos; in CLOTHESVERTEX()
309 t_pos = b.t_pos;
/dports/net/librdkafka/librdkafka-1.8.2/tests/
H A D0020-destroy_hang.c53 test_timing_t t_pos; in nonexist_part() local
91 TIMING_START(&t_pos, "COMMITTED"); in nonexist_part()
93 TIMING_STOP(&t_pos); in nonexist_part()
/dports/sysutils/vector/vector-0.10.0/cargo-crates/rdkafka-sys-2.0.0+1.4.2/librdkafka/tests/
H A D0020-destroy_hang.c53 test_timing_t t_pos; in nonexist_part() local
91 TIMING_START(&t_pos, "COMMITTED"); in nonexist_part()
93 TIMING_STOP(&t_pos); in nonexist_part()
/dports/sysutils/fluent-bit/fluent-bit-1.8.11/plugins/out_kafka/librdkafka-1.7.0/tests/
H A D0020-destroy_hang.c53 test_timing_t t_pos; in nonexist_part() local
91 TIMING_START(&t_pos, "COMMITTED"); in nonexist_part()
93 TIMING_STOP(&t_pos); in nonexist_part()
/dports/comms/gnuradio/gnuradio-3.8.4.0/gr-fec/lib/
H A Dscl_list.cc112 int t_pos = d_list_size; in set_info_bit() local
113 while (!d_path_list[t_pos]->owns_vectors) { in set_info_bit()
114 t_pos++; in set_info_bit()
116 steal_vector_ownership(d_path_list[i], d_path_list[t_pos]); in set_info_bit()
/dports/www/chromium-legacy/chromium-88.0.4324.182/third_party/llvm/lldb/source/Plugins/Process/FreeBSD/
H A DProcessFreeBSD.cpp134 for (tid_collection::const_iterator t_pos = m_run_tids.begin(), in DoResume() local
136 t_pos != t_end; ++t_pos) { in DoResume()
137 m_monitor->ThreadSuspend(*t_pos, false); in DoResume()
139 for (tid_collection::const_iterator t_pos = m_step_tids.begin(), in DoResume() local
141 t_pos != t_end; ++t_pos) { in DoResume()
142 m_monitor->ThreadSuspend(*t_pos, false); in DoResume()
145 Status error = SetupSoftwareSingleStepping(*t_pos); in DoResume()
150 for (tid_collection::const_iterator t_pos = m_suspend_tids.begin(), in DoResume() local
152 t_pos != t_end; ++t_pos) { in DoResume()
153 m_monitor->ThreadSuspend(*t_pos, true); in DoResume()
/dports/devel/llvm-cheri/llvm-project-37c49ff00e3eadce5d8703fdc4497f28458c64a8/lldb/source/Plugins/Process/FreeBSD/
H A DProcessFreeBSD.cpp134 for (tid_collection::const_iterator t_pos = m_run_tids.begin(), in DoResume() local
136 t_pos != t_end; ++t_pos) { in DoResume()
137 m_monitor->ThreadSuspend(*t_pos, false); in DoResume()
139 for (tid_collection::const_iterator t_pos = m_step_tids.begin(), in DoResume() local
141 t_pos != t_end; ++t_pos) { in DoResume()
142 m_monitor->ThreadSuspend(*t_pos, false); in DoResume()
145 Status error = SetupSoftwareSingleStepping(*t_pos); in DoResume()
150 for (tid_collection::const_iterator t_pos = m_suspend_tids.begin(), in DoResume() local
152 t_pos != t_end; ++t_pos) { in DoResume()
153 m_monitor->ThreadSuspend(*t_pos, true); in DoResume()
/dports/devel/llvm12/llvm-project-12.0.1.src/lldb/source/Plugins/Process/FreeBSD/
H A DProcessFreeBSD.cpp135 for (tid_collection::const_iterator t_pos = m_run_tids.begin(), in DoResume() local
137 t_pos != t_end; ++t_pos) { in DoResume()
138 m_monitor->ThreadSuspend(*t_pos, false); in DoResume()
140 for (tid_collection::const_iterator t_pos = m_step_tids.begin(), in DoResume() local
142 t_pos != t_end; ++t_pos) { in DoResume()
143 m_monitor->ThreadSuspend(*t_pos, false); in DoResume()
146 Status error = SetupSoftwareSingleStepping(*t_pos); in DoResume()
151 for (tid_collection::const_iterator t_pos = m_suspend_tids.begin(), in DoResume() local
153 t_pos != t_end; ++t_pos) { in DoResume()
154 m_monitor->ThreadSuspend(*t_pos, true); in DoResume()
/dports/devel/wasi-compiler-rt12/llvm-project-12.0.1.src/lldb/source/Plugins/Process/FreeBSD/
H A DProcessFreeBSD.cpp135 for (tid_collection::const_iterator t_pos = m_run_tids.begin(), in DoResume() local
137 t_pos != t_end; ++t_pos) { in DoResume()
138 m_monitor->ThreadSuspend(*t_pos, false); in DoResume()
140 for (tid_collection::const_iterator t_pos = m_step_tids.begin(), in DoResume() local
142 t_pos != t_end; ++t_pos) { in DoResume()
143 m_monitor->ThreadSuspend(*t_pos, false); in DoResume()
146 Status error = SetupSoftwareSingleStepping(*t_pos); in DoResume()
151 for (tid_collection::const_iterator t_pos = m_suspend_tids.begin(), in DoResume() local
153 t_pos != t_end; ++t_pos) { in DoResume()
154 m_monitor->ThreadSuspend(*t_pos, true); in DoResume()
/dports/devel/tinygo/tinygo-0.14.1/llvm-project/lldb/source/Plugins/Process/FreeBSD/
H A DProcessFreeBSD.cpp133 for (tid_collection::const_iterator t_pos = m_run_tids.begin(), in DoResume() local
135 t_pos != t_end; ++t_pos) { in DoResume()
136 m_monitor->ThreadSuspend(*t_pos, false); in DoResume()
138 for (tid_collection::const_iterator t_pos = m_step_tids.begin(), in DoResume() local
140 t_pos != t_end; ++t_pos) { in DoResume()
141 m_monitor->ThreadSuspend(*t_pos, false); in DoResume()
144 Status error = SetupSoftwareSingleStepping(*t_pos); in DoResume()
149 for (tid_collection::const_iterator t_pos = m_suspend_tids.begin(), in DoResume() local
151 t_pos != t_end; ++t_pos) { in DoResume()
152 m_monitor->ThreadSuspend(*t_pos, true); in DoResume()
/dports/science/nest/nest-simulator-3.1/testsuite/pytests/test_spatial/
H A Dtest_SynapseCollection_distance.py40 t_pos = nest.GetPosition(t_nodes)
49 x_ref = t_pos[t_nodes.index(t)][0] - s_pos[s_nodes.index(s)][0]
50 y_ref = t_pos[t_nodes.index(t)][1] - s_pos[s_nodes.index(s)][1]
53 z_ref = t_pos[t_nodes.index(t)][2] - s_pos[s_nodes.index(s)][2]
/dports/biology/ncbi-toolkit/ncbi/api/
H A Dmconsist.c30 Int4 a_pos, t_pos; in get_anchor_coordinates() local
79 t_pos = -1; in get_anchor_coordinates()
84 t_pos = (SeqLocStart(slp) + SeqLocStop(slp))/2; in get_anchor_coordinates()
90 if(t_pos >= 0 && a_pos >=0) in get_anchor_coordinates()
93 pos[n] = t_pos; in get_anchor_coordinates()
/dports/java/openjdk11/jdk11u-jdk-11.0.13-8-1/src/java.xml/share/classes/com/sun/org/apache/bcel/internal/util/
H A DBCELFactory.java297 final int t_pos = bh.getTarget().getPosition(); in visitBranchInstruction() local
299 if (pos > t_pos) { in visitBranchInstruction()
300 target = "ih_" + t_pos; in visitBranchInstruction()
328 int t_pos = bh.getTarget().getPosition(); in updateBranchTargets() local
329 _out.println(" " + name + ".setTarget(ih_" + t_pos + ");"); in updateBranchTargets()
333 t_pos = ihs[j].getPosition(); in updateBranchTargets()
334 _out.println(" " + name + ".setTarget(" + j + ", ih_" + t_pos + ");"); in updateBranchTargets()

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