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Searched refs:tagBases (Results 1 – 3 of 3) sorted by relevance

/dports/biology/pbbam/pbbam-0.18.0/tests/src/
H A Dtest_BamRecordMapping.cpp28 const std::string& tagBases, in MakeRecord() argument
40 tags["dt"] = tagBases; in MakeRecord()
41 tags["st"] = tagBases; in MakeRecord()
61 const std::string tagBases = "AACCGTTAGC"; in TEST() local
114 EXPECT_EQ(tagBases, view.DeletionTags()); in TEST()
195 EXPECT_EQ(tagBases, view.DeletionTags()); in TEST()
276 EXPECT_EQ(tagBases, view.DeletionTags()); in TEST()
630 const std::string tagBases = "AACCGTTAGC"; in TEST() local
662 EXPECT_EQ(tagBases, view.DeletionTags()); in TEST()
675 const std::string tagBases = "AACCGTTAGC"; in TEST() local
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H A Dtest_BamRecordClipping.cpp39 const std::string& tagBases, in MakeRecord() argument
54 tags["dt"] = tagBases; // deletionTag in MakeRecord()
55 tags["st"] = tagBases; // substitutionTag in MakeRecord()
96 tags["dt"] = tagBases; // deletionTag in MakeCCSRecord()
97 tags["st"] = tagBases; // substitutionTag in MakeCCSRecord()
129 const std::string tagBases = "AACCGTTAGC"; in TEST() local
704 const std::string tagBases = "AACCGTTAGC"; in TEST() local
1361 const std::string tagBases = "AACCGTTAGC"; in TEST() local
1415 const std::string tagBases = "AACCGTTAGC"; in TEST() local
1480 const std::string tagBases = "AACCGTTAGC"; in TEST() local
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H A Dtest_Compare.cpp34 const std::string& tagBases, in makeRecord() argument
46 tags["dt"] = tagBases; in makeRecord()
47 tags["st"] = tagBases; in makeRecord()
66 const std::string tagBases = "AACCGTTAGC"; in makeMappedRecords() local
75 BamRecord s1 = CompareTests::makeRecord(qStart, qEnd, seq, quals, tagBases, tagQuals, frames); in makeMappedRecords()
76 BamRecord s2 = CompareTests::makeRecord(qStart, qEnd, seq, quals, tagBases, tagQuals, frames); in makeMappedRecords()
77 BamRecord s3 = CompareTests::makeRecord(qStart, qEnd, seq, quals, tagBases, tagQuals, frames); in makeMappedRecords()
78 … BamRecord s1_rev = CompareTests::makeRecord(qStart, qEnd, seq, quals, tagBases, tagQuals, frames); in makeMappedRecords()
79 … BamRecord s2_rev = CompareTests::makeRecord(qStart, qEnd, seq, quals, tagBases, tagQuals, frames); in makeMappedRecords()
80 … BamRecord s3_rev = CompareTests::makeRecord(qStart, qEnd, seq, quals, tagBases, tagQuals, frames); in makeMappedRecords()