Searched refs:tagBases (Results 1 – 3 of 3) sorted by relevance
/dports/biology/pbbam/pbbam-0.18.0/tests/src/ |
H A D | test_BamRecordMapping.cpp | 28 const std::string& tagBases, in MakeRecord() argument 40 tags["dt"] = tagBases; in MakeRecord() 41 tags["st"] = tagBases; in MakeRecord() 61 const std::string tagBases = "AACCGTTAGC"; in TEST() local 114 EXPECT_EQ(tagBases, view.DeletionTags()); in TEST() 195 EXPECT_EQ(tagBases, view.DeletionTags()); in TEST() 276 EXPECT_EQ(tagBases, view.DeletionTags()); in TEST() 630 const std::string tagBases = "AACCGTTAGC"; in TEST() local 662 EXPECT_EQ(tagBases, view.DeletionTags()); in TEST() 675 const std::string tagBases = "AACCGTTAGC"; in TEST() local [all …]
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H A D | test_BamRecordClipping.cpp | 39 const std::string& tagBases, in MakeRecord() argument 54 tags["dt"] = tagBases; // deletionTag in MakeRecord() 55 tags["st"] = tagBases; // substitutionTag in MakeRecord() 96 tags["dt"] = tagBases; // deletionTag in MakeCCSRecord() 97 tags["st"] = tagBases; // substitutionTag in MakeCCSRecord() 129 const std::string tagBases = "AACCGTTAGC"; in TEST() local 704 const std::string tagBases = "AACCGTTAGC"; in TEST() local 1361 const std::string tagBases = "AACCGTTAGC"; in TEST() local 1415 const std::string tagBases = "AACCGTTAGC"; in TEST() local 1480 const std::string tagBases = "AACCGTTAGC"; in TEST() local [all …]
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H A D | test_Compare.cpp | 34 const std::string& tagBases, in makeRecord() argument 46 tags["dt"] = tagBases; in makeRecord() 47 tags["st"] = tagBases; in makeRecord() 66 const std::string tagBases = "AACCGTTAGC"; in makeMappedRecords() local 75 BamRecord s1 = CompareTests::makeRecord(qStart, qEnd, seq, quals, tagBases, tagQuals, frames); in makeMappedRecords() 76 BamRecord s2 = CompareTests::makeRecord(qStart, qEnd, seq, quals, tagBases, tagQuals, frames); in makeMappedRecords() 77 BamRecord s3 = CompareTests::makeRecord(qStart, qEnd, seq, quals, tagBases, tagQuals, frames); in makeMappedRecords() 78 … BamRecord s1_rev = CompareTests::makeRecord(qStart, qEnd, seq, quals, tagBases, tagQuals, frames); in makeMappedRecords() 79 … BamRecord s2_rev = CompareTests::makeRecord(qStart, qEnd, seq, quals, tagBases, tagQuals, frames); in makeMappedRecords() 80 … BamRecord s3_rev = CompareTests::makeRecord(qStart, qEnd, seq, quals, tagBases, tagQuals, frames); in makeMappedRecords()
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