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Searched refs:time_UtX (Results 1 – 9 of 9) sorted by relevance

/dports/biology/gemma/GEMMA-0.98.3/src/
H A Dmvlmm.h62 double time_UtX; // Time spent on optimization iterations. variable
H A Dlmm.h75 double time_UtX; // Time spent on optimization iterations. variable
H A Dvc.h77 double time_UtX; variable
H A Dlmm.cpp69 time_UtX = 0.0; in CopyFromParam()
90 cPar.time_UtX = time_UtX; in CopyToParam()
1411 time_UtX += (clock() - time_start) / (double(CLOCKS_PER_SEC) * 60.0); in AnalyzeGene()
1511 time_UtX += (clock() - time_start) / (double(CLOCKS_PER_SEC) * 60.0); in Analyze()
1837 time_UtX += (clock() - time_start) / (double(CLOCKS_PER_SEC) * 60.0); in AnalyzePlink()
2321 time_UtX += (clock() - time_start) / (double(CLOCKS_PER_SEC) * 60.0); in AnalyzeBimbamGXE()
2499 time_UtX += (clock() - time_start) / (double(CLOCKS_PER_SEC) * 60.0); in AnalyzePlinkGXE()
H A Dparam.h254 double time_UtX; // Time spent on calculating UX and Uy. variable
H A Dmvlmm.cpp75 time_UtX = 0.0; in CopyFromParam()
94 cPar.time_UtX = time_UtX; in CopyToParam()
2981 time_UtX = 0; in AnalyzeBimbam()
3274 time_UtX += (clock() - time_start) / (double(CLOCKS_PER_SEC) * 60.0); in AnalyzeBimbam()
3420 time_UtX = 0; in AnalyzePlink()
3750 time_UtX += (clock() - time_start) / (double(CLOCKS_PER_SEC) * 60.0); in AnalyzePlink()
3966 time_UtX = 0; in AnalyzeBimbamGXE()
4248 time_UtX += (clock() - time_start) / (double(CLOCKS_PER_SEC) * 60.0); in AnalyzeBimbamGXE()
4413 time_UtX = 0; in AnalyzePlinkGXE()
4724 time_UtX += (clock() - time_start) / (double(CLOCKS_PER_SEC) * 60.0); in AnalyzePlinkGXE()
H A Dvc.cpp71 time_UtX = 0.0; in CopyFromParam()
91 cPar.time_UtX = time_UtX; in CopyToParam()
H A Dgemma.cpp2933 cPar.time_UtX = (clock() - time_start) / (double(CLOCKS_PER_SEC) * 60.0); in BatchRun()
3043 cPar.time_UtX = in BatchRun()
3546 outfile << "## time on calculating UtX = " << cPar.time_UtX << " min " in WriteLog()
H A Dparam.cpp106 time_total(0.0), time_G(0.0), time_eigen(0.0), time_UtX(0.0), in PARAM()