Searched refs:tmp_bq_s2 (Results 1 – 9 of 9) sorted by relevance
| /dports/biology/vt/vt-0.57721/ |
| H A D | indel_genotyping_record.h | 76 int32_t tmp_bq_s1, tmp_bq_s2; variable
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| H A D | vntr_genotyping_record.h | 82 int32_t tmp_bq_s1, tmp_bq_s2; variable
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| H A D | snp_genotyping_record.h | 99 int32_t tmp_bq_s1, tmp_bq_s2; variable
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| H A D | complex_genotyping_record.h | 99 int32_t tmp_bq_s1, tmp_bq_s2; variable
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| H A D | genotyping_record.h | 124 int32_t tmp_bq_s1, tmp_bq_s2; variable
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| H A D | vntr_genotyping_record.cpp | 75 tmp_bq_s1 = tmp_bq_s2 = 0; in clearTemp()
352 …p_ra * Estimator::compute_correlation( tmp_dp_ra, tmp_bq_al, tmp_bq_s1, tmp_bq_s2, tmp_al_s1, tmp_… in flush_sample()
421 tmp_bq_s2 += (q*q); in add_allele()
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| H A D | snp_genotyping_record.cpp | 94 tmp_bq_s1 = tmp_bq_s2 = 0; in clearTemp()
355 …p_ra * Estimator::compute_correlation( tmp_dp_ra, tmp_bq_al, tmp_bq_s1, tmp_bq_s2, tmp_al_s1, tmp_… in flush_sample()
424 tmp_bq_s2 += (q*q); in add_allele()
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| H A D | indel_genotyping_record.cpp | 99 tmp_bq_s1 = tmp_bq_s2 = 0; in clearTemp()
368 …p_ra * Estimator::compute_correlation( tmp_dp_ra, tmp_bq_al, tmp_bq_s1, tmp_bq_s2, tmp_al_s1, tmp_… in flush_sample()
437 tmp_bq_s2 += (q*q); in add_allele()
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| H A D | complex_genotyping_record.cpp | 135 tmp_bq_s1 = tmp_bq_s2 = 0; in clearTemp()
404 …p_ra * Estimator::compute_correlation( tmp_dp_ra, tmp_bq_al, tmp_bq_s1, tmp_bq_s2, tmp_al_s1, tmp_… in flush_sample()
473 tmp_bq_s2 += (q*q); in add_allele()
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