Searched refs:tmp_mq_s1 (Results 1 – 9 of 9) sorted by relevance
| /dports/biology/vt/vt-0.57721/ |
| H A D | indel_genotyping_record.h | 77 int32_t tmp_mq_s1, tmp_mq_s2; variable
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| H A D | vntr_genotyping_record.h | 83 int32_t tmp_mq_s1, tmp_mq_s2; variable
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| H A D | snp_genotyping_record.h | 100 int32_t tmp_mq_s1, tmp_mq_s2; variable
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| H A D | complex_genotyping_record.h | 100 int32_t tmp_mq_s1, tmp_mq_s2; variable
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| H A D | genotyping_record.h | 125 int32_t tmp_mq_s1, tmp_mq_s2; variable
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| H A D | vntr_genotyping_record.cpp | 76 tmp_mq_s1 = tmp_mq_s2 = 0; in clearTemp()
353 …float mqr = sqrt_dp_ra * Estimator::compute_correlation( tmp_dp_ra, tmp_mq_al, tmp_mq_s1, tmp_mq_s… in flush_sample()
422 tmp_mq_s1 += mapq; in add_allele()
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| H A D | snp_genotyping_record.cpp | 95 tmp_mq_s1 = tmp_mq_s2 = 0; in clearTemp()
356 …float mqr = sqrt_dp_ra * Estimator::compute_correlation( tmp_dp_ra, tmp_mq_al, tmp_mq_s1, tmp_mq_s… in flush_sample()
425 tmp_mq_s1 += mapq; in add_allele()
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| H A D | indel_genotyping_record.cpp | 100 tmp_mq_s1 = tmp_mq_s2 = 0; in clearTemp()
369 …float mqr = sqrt_dp_ra * Estimator::compute_correlation( tmp_dp_ra, tmp_mq_al, tmp_mq_s1, tmp_mq_s… in flush_sample()
438 tmp_mq_s1 += mapq; in add_allele()
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| H A D | complex_genotyping_record.cpp | 136 tmp_mq_s1 = tmp_mq_s2 = 0; in clearTemp()
405 …float mqr = sqrt_dp_ra * Estimator::compute_correlation( tmp_dp_ra, tmp_mq_al, tmp_mq_s1, tmp_mq_s… in flush_sample()
474 tmp_mq_s1 += mapq; in add_allele()
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