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Searched refs:tot_al (Results 1 – 2 of 2) sorted by relevance

/dports/biology/hisat2/hisat2-2.2.1/
H A Daln_sink.h1657 …uint64_t tot_al = (met.nconcord_uni + met.nconcord_rep) * 2 + (met.ndiscord) * 2 + met.nunp_0_uni … in printAlSumm() local
1658 assert_leq(tot_al, tot_al_cand); in printAlSumm()
1679 out << "\tOverall alignment rate: "; printPct(out, tot_al, tot_al_cand); out << endl; in printAlSumm()
1813 printPct(out, tot_al, tot_al_cand); in printAlSumm()
/dports/biology/bowtie2/bowtie2-2.4.4/
H A Daln_sink.cpp518 uint64_t tot_al = in printAlSumm() local
525 assert_leq(tot_al, tot_al_cand); in printAlSumm()
526 printPct(cerr, tot_al, tot_al_cand); in printAlSumm()