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Searched refs:tupleOutput_Fusion (Results 1 – 4 of 4) sorted by relevance

/dports/biology/seqan1/seqan-1.3.1/apps/insegt/
H A Dfusion.h517 _streamPut(tupleOutput_Fusion, '\t'); in createTupleCountGFF_Fusion()
546 _streamPut(tupleOutput_Fusion, '\t'); in createTupleCountGFF_Fusion()
551 _streamWrite(tupleOutput_Fusion, "+"); in createTupleCountGFF_Fusion()
555 _streamWrite(tupleOutput_Fusion, "-"); in createTupleCountGFF_Fusion()
574 _streamWrite(tupleOutput_Fusion, "\t"); in createTupleCountGFF_Fusion()
584 _streamWrite(tupleOutput_Fusion, ":"); in createTupleCountGFF_Fusion()
588 _streamWrite(tupleOutput_Fusion, "^"); in createTupleCountGFF_Fusion()
595 _streamWrite(tupleOutput_Fusion, ":"); in createTupleCountGFF_Fusion()
598 _streamPut(tupleOutput_Fusion, '\t'); in createTupleCountGFF_Fusion()
602 _streamPut(tupleOutput_Fusion, '\t'); in createTupleCountGFF_Fusion()
[all …]
H A Doverlap_module.h903 std::fstream tupleOutput_Fusion; in ngsOverlapper() local
904 …tupleOutput_Fusion.open(toCString(pathTupleOutput_Fusion), std::ios_base::out | std::ios_base::tru… in ngsOverlapper()
905 …createTupleCountGFF_Fusion(tupleOutput_Fusion, tupleCountStore_Fusion, me, thresholdCount, thresho… in ngsOverlapper()
906 tupleOutput_Fusion.close(); in ngsOverlapper()
/dports/biology/seqan-apps/seqan-seqan-v2.4.0/apps/insegt/
H A Dfusion.h513 tupleOutput_Fusion << '^' in createTupleCountGFF_Fusion()
519 tupleOutput_Fusion << '\t'; in createTupleCountGFF_Fusion()
535 tupleOutput_Fusion << "^" in createTupleCountGFF_Fusion()
539 tupleOutput_Fusion << '\t'; in createTupleCountGFF_Fusion()
543 tupleOutput_Fusion << "+"; in createTupleCountGFF_Fusion()
545 tupleOutput_Fusion << "-"; in createTupleCountGFF_Fusion()
552 tupleOutput_Fusion << "^"; in createTupleCountGFF_Fusion()
554 tupleOutput_Fusion << "+"; in createTupleCountGFF_Fusion()
559 tupleOutput_Fusion << "\t"; in createTupleCountGFF_Fusion()
572 tupleOutput_Fusion << "^"; in createTupleCountGFF_Fusion()
[all …]
H A Doverlap_module.h909 std::fstream tupleOutput_Fusion; in ngsOverlapper() local
910 …tupleOutput_Fusion.open(toCString(options.tupleFusionOutputFileName), std::ios_base::out | std::io… in ngsOverlapper()
911 …createTupleCountGFF_Fusion(tupleOutput_Fusion, tupleCountStore_Fusion, fragStore, options.threshol… in ngsOverlapper()
912 tupleOutput_Fusion.close(); in ngsOverlapper()