Searched refs:uni_id_map (Results 1 – 7 of 7) sorted by relevance
/dports/biology/gcta/gcta_1.26.0_src/ |
H A D | mlm_assoc.cpp | 73 map<string, int> uni_id_map; in mlma() local 77 uni_id_map.insert(pair<string,int>(_fid[_keep[i]]+":"+_pid[_keep[i]], i)); in mlma() 86 iter=uni_id_map.find(phen_ID[i]); in mlma() 87 if(iter==uni_id_map.end()) continue; in mlma() 174 …construct_X(_n, uni_id_map, qcovar_flag, qcovar_num, qcovar_ID, qcovar, covar_flag, covar_num, cov… in mlma() 408 map<string, int> uni_id_map; in mlma_loco() local 412 uni_id_map.insert(pair<string,int>(_fid[_keep[i]]+":"+_pid[_keep[i]], i)); in mlma_loco() 418 iter=uni_id_map.find(phen_ID[i]); in mlma_loco() 419 if(iter==uni_id_map.end()) continue; in mlma_loco() 426 …construct_X(_n, uni_id_map, qcovar_flag, qcovar_num, qcovar_ID, qcovar, covar_flag, covar_num, cov… in mlma_loco()
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H A D | est_hsq.cpp | 233 map<string, int> uni_id_map; in fit_reml() local 245 iter = uni_id_map.find(phen_ID[i]); in fit_reml() 246 if (iter == uni_id_map.end()) continue; in fit_reml() 347 iter = uni_id_map.find(qGE_ID[i]); in fit_reml() 360 iter = uni_id_map.find(GE_ID[i]); in fit_reml() 361 if (iter != uni_id_map.end()) { in fit_reml() 452 iter = uni_id_map.find(qcovar_ID[i]); in construct_X() 466 iter = uni_id_map.find(covar_ID[i]); in construct_X() 1497 map<string, int> uni_id_map; in HE_reg() local 1508 iter = uni_id_map.find(phen_ID[i]); in HE_reg() [all …]
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H A D | bivar_reml.cpp | 67 map<string, int> uni_id_map; in fit_bivar_reml() local 71 uni_id_map.insert(pair<string, int>(_fid[_keep[i]] + ":" + _pid[_keep[i]], i)); in fit_bivar_reml() 83 iter = uni_id_map.find(phen_ID[i]); in fit_bivar_reml() 84 if (iter == uni_id_map.end()) continue; in fit_bivar_reml() 264 …construct_X(_keep.size(), uni_id_map, qcovar_flag, qcovar_num, qcovar_ID, qcovar, covar_flag, cova… in fit_bivar_reml()
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H A D | popu_genet.cpp | 278 map<string, int> uni_id_map; in read_subpopu() local 280 …for(i=0; i<_keep.size(); i++) uni_id_map.insert(pair<string,int>(_fid[_keep[i]]+":"+_pid[_keep[i]]… in read_subpopu() 284 iter=uni_id_map.find(ID[i]); in read_subpopu() 285 if(iter!=uni_id_map.end()) subpopu[iter->second]=subpopu_buf[i][0]; in read_subpopu()
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H A D | grm.cpp | 670 map<string, int> uni_id_map; in snp_pc_loading() local 674 uni_id_map.insert(pair<string,int>(_fid[_keep[i]]+":"+_pid[_keep[i]], i)); in snp_pc_loading() 682 iter = uni_id_map.find(eigenvec_ID[i]); in snp_pc_loading() 683 if(iter == uni_id_map.end()) continue; in snp_pc_loading()
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H A D | data.cpp | 1385 map<string, int> uni_id_map; in read_indi_blup() local 1387 …for (i = 0; i < _keep.size(); i++) uni_id_map.insert(pair<string, int>(_fid[_keep[i]] + ":" + _pid… in read_indi_blup() 1390 iter = uni_id_map.find(id[i]); in read_indi_blup() 1391 if (iter == uni_id_map.end()) continue; in read_indi_blup()
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H A D | gcta.h | 241 …void construct_X(int n, map<string, int> &uni_id_map, bool qcovar_flag, int qcovar_num, vector<str…
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