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Searched refs:uni_id_map (Results 1 – 7 of 7) sorted by relevance

/dports/biology/gcta/gcta_1.26.0_src/
H A Dmlm_assoc.cpp73 map<string, int> uni_id_map; in mlma() local
77 uni_id_map.insert(pair<string,int>(_fid[_keep[i]]+":"+_pid[_keep[i]], i)); in mlma()
86 iter=uni_id_map.find(phen_ID[i]); in mlma()
87 if(iter==uni_id_map.end()) continue; in mlma()
174 …construct_X(_n, uni_id_map, qcovar_flag, qcovar_num, qcovar_ID, qcovar, covar_flag, covar_num, cov… in mlma()
408 map<string, int> uni_id_map; in mlma_loco() local
412 uni_id_map.insert(pair<string,int>(_fid[_keep[i]]+":"+_pid[_keep[i]], i)); in mlma_loco()
418 iter=uni_id_map.find(phen_ID[i]); in mlma_loco()
419 if(iter==uni_id_map.end()) continue; in mlma_loco()
426 …construct_X(_n, uni_id_map, qcovar_flag, qcovar_num, qcovar_ID, qcovar, covar_flag, covar_num, cov… in mlma_loco()
H A Dest_hsq.cpp233 map<string, int> uni_id_map; in fit_reml() local
245 iter = uni_id_map.find(phen_ID[i]); in fit_reml()
246 if (iter == uni_id_map.end()) continue; in fit_reml()
347 iter = uni_id_map.find(qGE_ID[i]); in fit_reml()
360 iter = uni_id_map.find(GE_ID[i]); in fit_reml()
361 if (iter != uni_id_map.end()) { in fit_reml()
452 iter = uni_id_map.find(qcovar_ID[i]); in construct_X()
466 iter = uni_id_map.find(covar_ID[i]); in construct_X()
1497 map<string, int> uni_id_map; in HE_reg() local
1508 iter = uni_id_map.find(phen_ID[i]); in HE_reg()
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H A Dbivar_reml.cpp67 map<string, int> uni_id_map; in fit_bivar_reml() local
71 uni_id_map.insert(pair<string, int>(_fid[_keep[i]] + ":" + _pid[_keep[i]], i)); in fit_bivar_reml()
83 iter = uni_id_map.find(phen_ID[i]); in fit_bivar_reml()
84 if (iter == uni_id_map.end()) continue; in fit_bivar_reml()
264 …construct_X(_keep.size(), uni_id_map, qcovar_flag, qcovar_num, qcovar_ID, qcovar, covar_flag, cova… in fit_bivar_reml()
H A Dpopu_genet.cpp278 map<string, int> uni_id_map; in read_subpopu() local
280 …for(i=0; i<_keep.size(); i++) uni_id_map.insert(pair<string,int>(_fid[_keep[i]]+":"+_pid[_keep[i]]… in read_subpopu()
284 iter=uni_id_map.find(ID[i]); in read_subpopu()
285 if(iter!=uni_id_map.end()) subpopu[iter->second]=subpopu_buf[i][0]; in read_subpopu()
H A Dgrm.cpp670 map<string, int> uni_id_map; in snp_pc_loading() local
674 uni_id_map.insert(pair<string,int>(_fid[_keep[i]]+":"+_pid[_keep[i]], i)); in snp_pc_loading()
682 iter = uni_id_map.find(eigenvec_ID[i]); in snp_pc_loading()
683 if(iter == uni_id_map.end()) continue; in snp_pc_loading()
H A Ddata.cpp1385 map<string, int> uni_id_map; in read_indi_blup() local
1387 …for (i = 0; i < _keep.size(); i++) uni_id_map.insert(pair<string, int>(_fid[_keep[i]] + ":" + _pid… in read_indi_blup()
1390 iter = uni_id_map.find(id[i]); in read_indi_blup()
1391 if (iter == uni_id_map.end()) continue; in read_indi_blup()
H A Dgcta.h241 …void construct_X(int n, map<string, int> &uni_id_map, bool qcovar_flag, int qcovar_num, vector<str…