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Searched refs:v_pve (Results 1 – 5 of 5) sorted by relevance

/dports/biology/gemma/GEMMA-0.98.3/src/
H A Dvc.h68 vector<double> v_pve; variable
94 const gsl_vector *s_vec, const double df, vector<double> &v_pve,
128 const vector<size_t> &vec_cat, const vector<double> &v_pve,
H A Dvc.cpp94 cPar.v_pve = v_pve; in CopyToParam()
1459 v_pve.clear(); in CalcVCss()
1467 v_pve.push_back(d); in CalcVCss()
1648 v_pve.clear(); in CalcVChe()
1845 v_pve.clear(); in CalcVCreml()
1849 v_pve.push_back(d); in CalcVCreml()
2141 v_pve.clear(); in CalcVCacl()
2151 v_pve.push_back(d); in CalcVCacl()
2775 s_pve += v_pve[i]; in CalcCIss()
2843 d *= v_pve[i] * v_pve[j]; in CalcCIss()
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H A Dgemma.cpp1266 cPar.v_pve.push_back(atof(str.c_str())); in Assign()
2171 cPar.ni_study, cPar.v_pve, cPar.v_se_pve, cPar.pve_total, in BatchRun()
2203 cPar.ni_study, cPar.v_pve, cPar.v_se_pve, cPar.pve_total, in BatchRun()
2295 cPar.v_pve, cPar.v_se_pve, cPar.pve_total, cPar.se_pve_total, in BatchRun()
2533 CalcCIss(Xz, XWz, XtXWz, S, Svar, w, z, s_vec, vec_cat, cPar.v_pve, in BatchRun()
3186 for (size_t i = 0; i < cPar.v_pve.size(); i++) { in WriteLog()
3187 outfile << " " << cPar.v_pve[i]; in WriteLog()
3250 for (size_t i = 0; i < cPar.v_pve.size(); i++) { in WriteLog()
3251 outfile << " " << cPar.v_pve[i]; in WriteLog()
3335 for (size_t i = 0; i < cPar.v_pve.size(); i++) { in WriteLog()
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H A Dparam.h192 vector<double> v_pve; variable
H A Dparam.cpp992 if ((a_mode == 66 || a_mode == 67) && (v_pve.size() != n_vc)) { in CheckData()
994 << "the number of categories in the cat file:" << v_pve.size() << " " in CheckData()
2314 if (v_pve[i] >= 1 && pve_flag == 1) { in UpdateWeight()
2316 } else if (v_pve[i] <= 0 && pve_flag == 1) { in UpdateWeight()
2320 mapRS2wcat[it->first][i] * v_pve[i]; in UpdateWeight()