Searched refs:v_se_sigma2 (Results 1 – 4 of 4) sorted by relevance
/dports/biology/gemma/GEMMA-0.98.3/src/ |
H A D | vc.h | 67 vector<double> v_se_sigma2; variable 96 vector<double> &v_sigma2, vector<double> &v_se_sigma2, 130 vector<double> &v_sigma2, vector<double> &v_se_sigma2,
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H A D | vc.cpp | 97 cPar.v_se_sigma2 = v_se_sigma2; in CopyToParam() 1462 v_se_sigma2.clear(); in CalcVCss() 1474 v_se_sigma2.push_back(d); in CalcVCss() 1651 v_se_sigma2.clear(); in CalcVChe() 1673 v_se_sigma2.push_back(sqrt(v) * r * var_y_new); in CalcVChe() 1684 cout << v_se_sigma2[i] << " "; in CalcVChe() 1821 v_se_sigma2.clear(); in CalcVCreml() 1835 v_se_sigma2.push_back(sqrt(d)); in CalcVCreml() 2144 v_se_sigma2.clear(); in CalcVCacl() 2174 cout << v_se_sigma2[i] << " "; in CalcVCacl() [all …]
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H A D | gemma.cpp | 2172 cPar.se_pve_total, cPar.v_sigma2, cPar.v_se_sigma2, in BatchRun() 2204 cPar.se_pve_total, cPar.v_sigma2, cPar.v_se_sigma2, in BatchRun() 2296 cPar.v_sigma2, cPar.v_se_sigma2, cPar.v_enrich, in BatchRun() 2535 cPar.v_se_sigma2, cPar.v_enrich, cPar.v_se_enrich); in BatchRun() 3210 for (size_t i = 0; i < cPar.v_se_sigma2.size(); i++) { in WriteLog() 3211 outfile << " " << cPar.v_se_sigma2[i]; in WriteLog() 3273 for (size_t i = 0; i < cPar.v_se_sigma2.size(); i++) { in WriteLog() 3274 outfile << " " << cPar.v_se_sigma2[i]; in WriteLog() 3358 for (size_t i = 0; i < cPar.v_se_sigma2.size(); i++) { in WriteLog() 3359 outfile << " " << cPar.v_se_sigma2[i]; in WriteLog()
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H A D | param.h | 196 vector<double> v_se_sigma2; variable
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