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Searched refs:v_se_sigma2 (Results 1 – 4 of 4) sorted by relevance

/dports/biology/gemma/GEMMA-0.98.3/src/
H A Dvc.h67 vector<double> v_se_sigma2; variable
96 vector<double> &v_sigma2, vector<double> &v_se_sigma2,
130 vector<double> &v_sigma2, vector<double> &v_se_sigma2,
H A Dvc.cpp97 cPar.v_se_sigma2 = v_se_sigma2; in CopyToParam()
1462 v_se_sigma2.clear(); in CalcVCss()
1474 v_se_sigma2.push_back(d); in CalcVCss()
1651 v_se_sigma2.clear(); in CalcVChe()
1673 v_se_sigma2.push_back(sqrt(v) * r * var_y_new); in CalcVChe()
1684 cout << v_se_sigma2[i] << " "; in CalcVChe()
1821 v_se_sigma2.clear(); in CalcVCreml()
1835 v_se_sigma2.push_back(sqrt(d)); in CalcVCreml()
2144 v_se_sigma2.clear(); in CalcVCacl()
2174 cout << v_se_sigma2[i] << " "; in CalcVCacl()
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H A Dgemma.cpp2172 cPar.se_pve_total, cPar.v_sigma2, cPar.v_se_sigma2, in BatchRun()
2204 cPar.se_pve_total, cPar.v_sigma2, cPar.v_se_sigma2, in BatchRun()
2296 cPar.v_sigma2, cPar.v_se_sigma2, cPar.v_enrich, in BatchRun()
2535 cPar.v_se_sigma2, cPar.v_enrich, cPar.v_se_enrich); in BatchRun()
3210 for (size_t i = 0; i < cPar.v_se_sigma2.size(); i++) { in WriteLog()
3211 outfile << " " << cPar.v_se_sigma2[i]; in WriteLog()
3273 for (size_t i = 0; i < cPar.v_se_sigma2.size(); i++) { in WriteLog()
3274 outfile << " " << cPar.v_se_sigma2[i]; in WriteLog()
3358 for (size_t i = 0; i < cPar.v_se_sigma2.size(); i++) { in WriteLog()
3359 outfile << " " << cPar.v_se_sigma2[i]; in WriteLog()
H A Dparam.h196 vector<double> v_se_sigma2; variable