Searched refs:v_sigma2 (Results 1 – 4 of 4) sorted by relevance
/dports/biology/gemma/GEMMA-0.98.3/src/ |
H A D | vc.h | 66 vector<double> v_sigma2; variable 96 vector<double> &v_sigma2, vector<double> &v_se_sigma2, 130 vector<double> &v_sigma2, vector<double> &v_se_sigma2,
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H A D | vc.cpp | 96 cPar.v_sigma2 = v_sigma2; in CopyToParam() 1461 v_sigma2.clear(); in CalcVCss() 1472 v_sigma2.push_back(d); in CalcVCss() 1650 v_sigma2.clear(); in CalcVChe() 1750 d = v_sigma2[i]; in CalcVCreml() 1752 if (v_sigma2[i] <= 0) { in CalcVCreml() 1820 v_sigma2.clear(); in CalcVCreml() 1828 v_sigma2.push_back(d); in CalcVCreml() 1842 s += v_sigma2[n_vc]; in CalcVCreml() 2143 v_sigma2.clear(); in CalcVCacl() [all …]
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H A D | gemma.cpp | 2172 cPar.se_pve_total, cPar.v_sigma2, cPar.v_se_sigma2, in BatchRun() 2204 cPar.se_pve_total, cPar.v_sigma2, cPar.v_se_sigma2, in BatchRun() 2296 cPar.v_sigma2, cPar.v_se_sigma2, cPar.v_enrich, in BatchRun() 2534 cPar.v_se_pve, cPar.pve_total, cPar.se_pve_total, cPar.v_sigma2, in BatchRun() 3204 for (size_t i = 0; i < cPar.v_sigma2.size(); i++) { in WriteLog() 3205 outfile << " " << cPar.v_sigma2[i]; in WriteLog() 3267 for (size_t i = 0; i < cPar.v_sigma2.size(); i++) { in WriteLog() 3268 outfile << " " << cPar.v_sigma2[i]; in WriteLog() 3352 for (size_t i = 0; i < cPar.v_sigma2.size(); i++) { in WriteLog() 3353 outfile << " " << cPar.v_sigma2[i]; in WriteLog()
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H A D | param.h | 195 vector<double> v_sigma2; variable
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