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Searched refs:v_sigma2 (Results 1 – 4 of 4) sorted by relevance

/dports/biology/gemma/GEMMA-0.98.3/src/
H A Dvc.h66 vector<double> v_sigma2; variable
96 vector<double> &v_sigma2, vector<double> &v_se_sigma2,
130 vector<double> &v_sigma2, vector<double> &v_se_sigma2,
H A Dvc.cpp96 cPar.v_sigma2 = v_sigma2; in CopyToParam()
1461 v_sigma2.clear(); in CalcVCss()
1472 v_sigma2.push_back(d); in CalcVCss()
1650 v_sigma2.clear(); in CalcVChe()
1750 d = v_sigma2[i]; in CalcVCreml()
1752 if (v_sigma2[i] <= 0) { in CalcVCreml()
1820 v_sigma2.clear(); in CalcVCreml()
1828 v_sigma2.push_back(d); in CalcVCreml()
1842 s += v_sigma2[n_vc]; in CalcVCreml()
2143 v_sigma2.clear(); in CalcVCacl()
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H A Dgemma.cpp2172 cPar.se_pve_total, cPar.v_sigma2, cPar.v_se_sigma2, in BatchRun()
2204 cPar.se_pve_total, cPar.v_sigma2, cPar.v_se_sigma2, in BatchRun()
2296 cPar.v_sigma2, cPar.v_se_sigma2, cPar.v_enrich, in BatchRun()
2534 cPar.v_se_pve, cPar.pve_total, cPar.se_pve_total, cPar.v_sigma2, in BatchRun()
3204 for (size_t i = 0; i < cPar.v_sigma2.size(); i++) { in WriteLog()
3205 outfile << " " << cPar.v_sigma2[i]; in WriteLog()
3267 for (size_t i = 0; i < cPar.v_sigma2.size(); i++) { in WriteLog()
3268 outfile << " " << cPar.v_sigma2[i]; in WriteLog()
3352 for (size_t i = 0; i < cPar.v_sigma2.size(); i++) { in WriteLog()
3353 outfile << " " << cPar.v_sigma2[i]; in WriteLog()
H A Dparam.h195 vector<double> v_sigma2; variable