/dports/biology/ugene/ugene-40.1/data/cmdline/ |
H A D | pwm-build.uwl | 15 wmatrix-build { 16 type:wmatrix-build; 19 wmatrix-write { 20 type:wmatrix-write; 27 wmatrix-build.out-wmatrix->wmatrix-write.in-wmatrix 31 wmatrix-build.wmatrix->wmatrix-write.in-wmatrix.wmatrix 39 wmatrix-build.matrix-type { 47 wmatrix-write.url-out { 59 wmatrix-build { 66 wmatrix-write { [all …]
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H A D | pwm-search.uwl | 15 wmatrix-read { 16 type:wmatrix-read; 19 wmatrix-search { 20 type:wmatrix-search; 33 wmatrix-read.out-wmatrix->wmatrix-search.in-wmatrix 38 wmatrix-read.wmatrix->wmatrix-search.in-wmatrix.wmatrix 49 wmatrix-read.url-in { 61 wmatrix-search.strand { 81 wmatrix-read { 87 wmatrix-search { [all …]
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H A D | pfm-search.uwl | 19 fmatrix-to-wmatrix { 20 type:fmatrix-to-wmatrix; 23 wmatrix-search { 24 type:wmatrix-search; 38 fmatrix-to-wmatrix.out-wmatrix->wmatrix-search.in-wmatrix 44 fmatrix-to-wmatrix.wmatrix->wmatrix-search.in-wmatrix.wmatrix 67 wmatrix-search.min-score { 75 wmatrix-search.strand { 95 fmatrix-to-wmatrix { 108 wmatrix-search { [all …]
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/dports/biology/ugene/ugene-40.1/data/workflow_samples/Data merging/ |
H A D | tfbs.uwl | 31 wmatrix-search { 32 type:wmatrix-search; 40 wmatrix-read { 41 type:wmatrix-read; 51 wmatrix-read.out-wmatrix->wmatrix-search.in-wmatrix 63 wmatrix-read.wmatrix->wmatrix-search.in-wmatrix.wmatrix 99 wmatrix-search { 105 in-wmatrix.angle:27.613; 115 wmatrix-read { 120 out-wmatrix.angle:323.393; [all …]
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/dports/science/nwchem/nwchem-7b21660b82ebd85ef659f6fba7e1e73433b0bd0a/src/nwpw/nwpwlib/utilities/paw_utilities/ |
H A D | nwpw_compcharge2.F | 99 real*8 wmatrix(nprj,nprj,2) local 109 call dcopy(2*nprj*nprj,0.0d0,0,wmatrix,1) 113 wmatrix(j,j,ms) = wmatrix(j,j,ms) + sw1(n,j)*sw1(n,j) 123 wmatrix(i,j,ms) = wmatrix(i,j,ms) + tmp 124 wmatrix(j,i,ms) = wmatrix(j,i,ms) + tmp 138 real*8 function nwpw_compcharge_Watom1_sub(ispin,nprj,wmatrix, 145 real*8 wmatrix(nprj,nprj,2) 179 real*8 function nwpw_compcharge_Watom2_sub(ispin,nprj,wmatrix, 186 real*8 wmatrix(nprj,nprj,2) 221 real*8 wmatrix(nprj,nprj,2) [all …]
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H A D | nwpw_compcharge.F | 943 real*8 wmatrix(nprj,nprj,ispin) local 997 > + coeff*wmatrix(iprj,jprj,ms) 5092 real*8 wmatrix(nprj,nprj,ispin) 5136 real*8 wmatrix(nprj,nprj,ispin) 5162 w = wmatrix(iprj,jprj,1) + wmatrix(iprj,jprj,ispin) 5163 w1 = wmatrix(iprj1,jprj1,1) + wmatrix(iprj1,jprj1,ispin) 5190 > wmatrix) 5194 real*8 wmatrix(nprj,nprj,ispin) 5242 real*8 wmatrix(nprj,nprj,ispin) 5269 w = wmatrix(iprj,jprj,1) + wmatrix(iprj,jprj,ispin) [all …]
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/dports/science/nwchem-data/nwchem-7.0.2-release/src/nwpw/nwpwlib/utilities/paw_utilities/ |
H A D | nwpw_compcharge2.F | 99 real*8 wmatrix(nprj,nprj,2) local 109 call dcopy(2*nprj*nprj,0.0d0,0,wmatrix,1) 113 wmatrix(j,j,ms) = wmatrix(j,j,ms) + sw1(n,j)*sw1(n,j) 123 wmatrix(i,j,ms) = wmatrix(i,j,ms) + tmp 124 wmatrix(j,i,ms) = wmatrix(j,i,ms) + tmp 138 real*8 function nwpw_compcharge_Watom1_sub(ispin,nprj,wmatrix, 145 real*8 wmatrix(nprj,nprj,2) 179 real*8 function nwpw_compcharge_Watom2_sub(ispin,nprj,wmatrix, 186 real*8 wmatrix(nprj,nprj,2) 221 real*8 wmatrix(nprj,nprj,2) [all …]
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H A D | nwpw_compcharge.F | 943 real*8 wmatrix(nprj,nprj,ispin) local 997 > + coeff*wmatrix(iprj,jprj,ms) 4910 real*8 wmatrix(nprj,nprj,ispin) 4954 real*8 wmatrix(nprj,nprj,ispin) 4980 w = wmatrix(iprj,jprj,1) + wmatrix(iprj,jprj,ispin) 4981 w1 = wmatrix(iprj1,jprj1,1) + wmatrix(iprj1,jprj1,ispin) 5008 > wmatrix) 5012 real*8 wmatrix(nprj,nprj,ispin) 5060 real*8 wmatrix(nprj,nprj,ispin) 5087 w = wmatrix(iprj,jprj,1) + wmatrix(iprj,jprj,ispin) [all …]
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/dports/finance/R-cran-gmm/gmm/R/ |
H A D | FinRes.R | 64 } else if ( (is.null(P$weightsMatrix)) & (P$wmatrix != "ident") ) { 100 if(P$wmatrix == "ident") 113 z$infWmatrix <- P$wmatrix 115 if (P$wmatrix=="ident") 143 } else if ( (is.null(P$weightsMatrix)) & (P$wmatrix != "ident") ) { 175 if(P$wmatrix == "ident") 190 z$infWmatrix <- P$wmatrix
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H A D | sysGmm.R | 17 … res <- sysGmm(g, h, wmatrix = "optimal", vcov = "CondHom", commonCoef=commonCoef, data=data) 63 sysGmm <- function(g, h, wmatrix = c("optimal","ident"), argument 72 wmatrix <- match.arg(wmatrix) 78 wmatrix <- "optimal" 81 all_args<-list(data = data, g = g, h = h, wmatrix = wmatrix, vcov = vcov, kernel = kernel, nameattr
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H A D | gmm.R | 14 gmm <- function(g,x,t0=NULL,gradv=NULL, type=c("twoStep","cue","iterative"), wmatrix = c("optimal",… argument 23 wmatrix <- match.arg(wmatrix) 32 wmatrix <- "optimal" 36 …ist(data = data, g = g, x = x, t0 = t0, gradv = gradv, type = type, wmatrix = wmatrix, vcov = vcov… nameattr 50 evalGmm <- function(g, x, t0, tetw=NULL, gradv=NULL, wmatrix = c("optimal","ident"), argument 62 wmatrix <- match.arg(wmatrix) 68 wmatrix <- "optimal" 72 type = type, wmatrix = wmatrix, vcov = vcov, kernel = kernel, nameattr
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H A D | momentEstim.R | 189 if (q == k2 | P$wmatrix == "ident") 296 if (q == k2 | P$wmatrix == "ident") 328 if (P$vcov == "iid" & P$wmatrix != "ident") 348 if (q == k2 | P$wmatrix == "ident") 395 if (P$vcov == "iid" & P$wmatrix != "ident") 464 if (q == k2 | P$wmatrix == "ident") 554 if (q == k2 | P$wmatrix == "ident") 642 if (q == k2 | P$wmatrix == "ident") 645 res <- gmm(P$allArg$g,P$allArg$x,P$t0,wmatrix="ident",optfct=P$optfct, ...) 655 res <- try(gmm(P$allArg$g,P$allArg$x,P$t0,wmatrix="ident",
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/dports/math/py-statsmodels/statsmodels-0.13.1/statsmodels/sandbox/regression/tests/ |
H A D | results_gmm_poisson.py | 30 wmatrix="robust", 125 wmatrix="robust", 219 wmatrix="robust", 314 wmatrix="robust", 408 wmatrix="robust", 505 wmatrix="robust",
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H A D | results_gmm_griliches.py | 37 wmatrix="robust", 170 wmatrix="robust",
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H A D | results_gmm_griliches_iter.py | 31 wmatrix="robust",
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/dports/science/nwchem/nwchem-7b21660b82ebd85ef659f6fba7e1e73433b0bd0a/src/selci/ |
H A D | couple.c | 607 FILE *wmatrix; in SELCI_COUPLE() local 659 if ( (wmatrix = fopen(filename, "w")) == (FILE *) NULL) in SELCI_COUPLE() 662 (void) fprintf(wmatrix,"%d\n%d\n",multi,ns); in SELCI_COUPLE() 664 (void) fprintf(wmatrix,"%d ",bd[multi][i]); in SELCI_COUPLE() 665 (void) fprintf(wmatrix,"\n"); in SELCI_COUPLE() 710 (void) fprintf(wmatrix,"%.14g\n",*temp++); in SELCI_COUPLE() 728 (void) fprintf(wmatrix,"%.14g\n",*temp++); in SELCI_COUPLE() 750 (void) fprintf(wmatrix,"%.14g\n",*ttemp++); in SELCI_COUPLE() 772 (void) fprintf(wmatrix,"%.14g\n",*ttemp++); in SELCI_COUPLE() 783 (void) fclose(wmatrix); in SELCI_COUPLE()
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/dports/science/nwchem-data/nwchem-7.0.2-release/src/selci/ |
H A D | couple.c | 607 FILE *wmatrix; in SELCI_COUPLE() local 659 if ( (wmatrix = fopen(filename, "w")) == (FILE *) NULL) in SELCI_COUPLE() 662 (void) fprintf(wmatrix,"%d\n%d\n",multi,ns); in SELCI_COUPLE() 664 (void) fprintf(wmatrix,"%d ",bd[multi][i]); in SELCI_COUPLE() 665 (void) fprintf(wmatrix,"\n"); in SELCI_COUPLE() 710 (void) fprintf(wmatrix,"%.14g\n",*temp++); in SELCI_COUPLE() 728 (void) fprintf(wmatrix,"%.14g\n",*temp++); in SELCI_COUPLE() 750 (void) fprintf(wmatrix,"%.14g\n",*ttemp++); in SELCI_COUPLE() 772 (void) fprintf(wmatrix,"%.14g\n",*ttemp++); in SELCI_COUPLE() 783 (void) fclose(wmatrix); in SELCI_COUPLE()
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/dports/math/R-cran-Matching/Matching/R/ |
H A D | GenMatching.R | 545 wmatrix <- diag(x, nrow=nvars) functionVar 546 if ( min(eigen(wmatrix, symmetric=TRUE, only.values=TRUE)$values) < tolerance ) 547 wmatrix <- wmatrix + diag(nvars)*tolerance 549 ww <- chol(wmatrix) 994 wmatrix <- diag(rr$par, nrow=nvars) functionVar 996 if ( min(eigen(wmatrix, symmetric=TRUE, only.values=TRUE)$values) < tolerance ) 997 wmatrix <- wmatrix + diag(nvars)*tolerance 999 ww <- chol(wmatrix) 1006 rr2 <- list(value=rr$value, par=rr$par, Weight.matrix=wmatrix, matches=mout, ecaliper=NULL) 1022 … rr2 <- list(value=rr$value, par=rr$par, Weight.matrix=wmatrix, matches=mout, ecaliper=CaliperVec)
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/dports/print/qpdf/qpdf-10.5.0/libqpdf/ |
H A D | QPDFPageObjectHelper.cc | 963 QPDFMatrix wmatrix; // work matrix in getMatrixForFormXObjectPlacement() local 974 wmatrix.concat(tmatrix); in getMatrixForFormXObjectPlacement() 984 wmatrix.concat(fmatrix); in getMatrixForFormXObjectPlacement() 996 QPDFObjectHandle::Rectangle T = wmatrix.transformRectangle(bbox); in getMatrixForFormXObjectPlacement() 1029 wmatrix = QPDFMatrix(); in getMatrixForFormXObjectPlacement() 1030 wmatrix.scale(scale, scale); in getMatrixForFormXObjectPlacement() 1031 wmatrix.concat(tmatrix); in getMatrixForFormXObjectPlacement() 1032 wmatrix.concat(fmatrix); in getMatrixForFormXObjectPlacement() 1034 T = wmatrix.transformRectangle(bbox); in getMatrixForFormXObjectPlacement()
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/dports/games/xonotic/Xonotic/misc/tools/ |
H A D | weapon-profiler-analyzer.pl | 144 my @wmatrix = map { [ map { 0 } @allweps ] } @allweps; 163 $wmatrix[$i][$j] = $w; # symmetric 170 @val = SolveBestSquares(\@dmatrix, \@wmatrix);
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/dports/finance/R-cran-fBasics/fBasics/R/ |
H A D | builtin-gmmGmm.R | 65 wmatrix = c("optimal","ident"), vcov=c("HAC","iid"), argument 74 wmatrix <- match.arg(wmatrix) 186 if (q == k2 | wmatrix == "ident") 358 if (wmatrix == "optimal")
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/dports/science/mmdb2/mmdb2-2.0.20/mmdb2/ |
H A D | mmdb_mattype.h | 165 typedef wvector * wmatrix; typedef 175 typedef wmatrix * wmatrix3; 293 ( wmatrix & W, word N, word M, word ShiftN=1, word ShiftM=1 ); 314 extern void FreeMatrixMemory ( wmatrix & W, word N,
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/dports/finance/R-cran-gmm/gmm/inst/doc/ |
H A D | gmm_with_R.R | 236 print(res<-gmm(g4,x5t[,4:7],wmatrix="ident")) 263 tet0 <- gmm(g4,x=x5t[,4:7],wmatrix="ident")$coef
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/dports/finance/R-cran-gmm/gmm/man/ |
H A D | sysGmm.Rd | 15 sysGmm(g, h, wmatrix = c("optimal","ident"), 32 \item{wmatrix}{Which weighting matrix should be used in the objective function. By default, it is t…
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/dports/science/nwchem/nwchem-7b21660b82ebd85ef659f6fba7e1e73433b0bd0a/src/nwpw/pspw/lib/psp/ |
H A D | paw.F | 4043 subroutine psp_gen_density_matrix(ispin,ne,nprj,sw1,wmatrix) argument 4047 real*8 wmatrix(nprj,nprj,ispin) local 4066 call Parallel_shared_vector_zero(.true.,ispin*nprj*nprj,wmatrix) 4073 wmatrix(j,j,ms) = wmatrix(j,j,ms) + sw1(n,j)*sw1(n,j) 4086 wmatrix(i,j,ms) = wmatrix(i,j,ms) + tmp 4087 wmatrix(j,i,ms) = wmatrix(j,i,ms) + tmp 4096 call Parallel_Vector_SumAll(ispin*nprj*nprj,wmatrix)
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