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123

/dports/math/R-cran-KFAS/KFAS/R/
H A Dplot.SSModel.R34 plot.SSModel <- function(x, nsim = 0, zerotol = 0, expected = FALSE, ...) { argument
54 res <- rstandard(out, zerotol = zerotol)
59 irregular = rstandard(out, "pearson", zerotol = zerotol)),
68 plot(rstandard(out, "pearson", zerotol = zerotol), main = "Irregular (smoothed) residuals")
81 res <- rstandard(out, zerotol = zerotol)
87 irregular = rstandard(out, "pearson", zerotol = zerotol)),
96 plot(rstandard(out, "pearson", zerotol = zerotol), main = "Irregular (smoothed) residuals")
H A DinternalResids.R30 recursive_standardized <- function(object, stype, zerotol = 0, expected = FALSE) { argument
87 pearson_standardized <- function(object, stype, zerotol = 0, ...) { argument
107 pos <- D > zerotol * max(D, 0)
118 pos <- D > zerotol * max(D, 0)
138 pos <- D > zerotol * max(D, 0)
149 pos <- D > zerotol * max(D, 0)
159 state_standardized <- function(object, stype, zerotol = 0, ...) { argument
174 pos <- D > zerotol * max(D, 0)
182 pos <- D > zerotol * max(D, 0)
/dports/math/octave-forge-level-set/level-set/inst/
H A Dls_normalise.m18 ## @deftypefn {Function File} {@var{phi} =} ls_normalise (@var{phi}, @var{h} = 1, @var{zerotol} = …
22 ## function has a magnitude of at least @var{h} * @var{zerotol}. The
35 function phi = ls_normalise (phi, h = 1, zerotol = 1e-3)
40 zerotol *= h;
43 phi(exz) = zerotol * (1 - 2 * double (signbit (phi(exz))));
45 phi(exz) = zerotol;
47 zeroPts = (abs (phi) < zerotol);
48 phi(zeroPts) = zerotol * sign (phi(zeroPts));
50 assert (all (abs (phi(:)) >= zerotol));
/dports/science/nwchem-data/nwchem-7.0.2-release/src/basis/doc/
H A Dapi99 lab_two_4(bra_basis, ket_basis, ish, jsh, ksh, lsh, zerotol,
105 lab_two_3 (bra_basis, ket_basis, canonical_bra, canonical_both, ish, jsh, ksh, zerotol,
111 lab_two_2 (bra_basis, ket_basis, canonical_both, ish, jsh, zerotol, lscr, scr, eri,
120 lab_one_ke (i_basis, j_basis, ish, jsh, zerotol, ilab, jlab, T, numt)
121 lab_one_pe (i_basis, j_basis, ish, jsh, zerotol, ilab, jlab, V, numv)
122 lab_one_ov (i_basis, j_basis, ish, jsh, zerotol, ilab, jlab, S, nums)
123 lab_one_h1 (i_basis, j_basis, ish, jsh, zerotol, ilab, jlab, H1, numh1)
124 lab_one_all(i_basis, j_basis, ish, jsh, zerotol, ilab, jlab, S, T, V, numstv)
129 lab_one_3ov(i_basis, j_basis, k_basis, ish, jsh, ksh, zerotol,
134 lab_mpole(i_basis, j_basis, Lvalue, ish, jsh, MPINTS, ilab, jlab, zerotol)
/dports/science/nwchem/nwchem-7b21660b82ebd85ef659f6fba7e1e73433b0bd0a/src/basis/doc/
H A Dapi99 lab_two_4(bra_basis, ket_basis, ish, jsh, ksh, lsh, zerotol,
105 lab_two_3 (bra_basis, ket_basis, canonical_bra, canonical_both, ish, jsh, ksh, zerotol,
111 lab_two_2 (bra_basis, ket_basis, canonical_both, ish, jsh, zerotol, lscr, scr, eri,
120 lab_one_ke (i_basis, j_basis, ish, jsh, zerotol, ilab, jlab, T, numt)
121 lab_one_pe (i_basis, j_basis, ish, jsh, zerotol, ilab, jlab, V, numv)
122 lab_one_ov (i_basis, j_basis, ish, jsh, zerotol, ilab, jlab, S, nums)
123 lab_one_h1 (i_basis, j_basis, ish, jsh, zerotol, ilab, jlab, H1, numh1)
124 lab_one_all(i_basis, j_basis, ish, jsh, zerotol, ilab, jlab, S, T, V, numstv)
129 lab_one_3ov(i_basis, j_basis, k_basis, ish, jsh, ksh, zerotol,
134 lab_mpole(i_basis, j_basis, Lvalue, ish, jsh, MPINTS, ilab, jlab, zerotol)
/dports/science/nwchem/nwchem-7b21660b82ebd85ef659f6fba7e1e73433b0bd0a/src/NWints/api/
H A Dintb_2e4c.F76 $ num_q, q4, use_q4, zerotol, canonicalize,
114 double precision zerotol !< [Input] zero integral threshold local
130 $ num_q, q4, use_q4, zerotol, canonicalize,
141 $ nsp, q4, use_q4, zerotol, canonicalize,
172 $ more_ints_txs, scr, lscr, zerotol,'scfd_int')
213 $ num_q, q4, use_q4, zerotol, canonicalize,
251 double precision zerotol !< [Input] zero integral threshold local
302 $ zerotol, canonicalize, leri_left, eri(ip_int),
H A Dapi.doc15 . int_l2e4c(bra_basis, ish, jsh, ket_basis, ksh, lsh, zerotol,
24 . int_lgen1e (i_basis, ish, j_basis, jsh, zerotol, ilab, jlab, len[S|T|V|H1], [S|T|V|H1], [nums|num…
25 . int_l1eall (i_basis, ish, j_basis, jsh, zerotol, ilab, jlab, S, T, V, numstv)
37 . int_l2e3c (bra_basis, ish, ket_basis, jsh, ksh, zerotol, canket,
43 . int_l2e2c (bra_basis, ish, ket_basis, jsh, zerotol, leri, eri,
50 . int_l1e3ov(i_basis, ish, j_basis, jsh, k_basis, ksh, zerotol,
57 int_lmpole(i_basis, j_basis, Lvalue, ish, jsh, MPINTS, ilab, jlab, zerotol)
H A Dintbdd_2e4c.F27 & num_q, q4, use_q4, zerotol, canonicalize,
62 double precision zerotol !< [Input] zero integral threshold local
82 & more_ints_txs, scr, lscr, zerotol,'der2_int')
118 & num_q, q4, use_q4, zerotol, canonicalize,
152 double precision zerotol !< [Input] zero integral threshold local
248 & zerotol,canonicalize)
264 & zerotol,canonicalize) argument
276 double precision zerotol local
320 if (val_max.gt.zerotol) then
H A Dintbd_2e4c.F28 & num_q, q4, use_q4, zerotol, canonicalize,
62 double precision zerotol !< [Input] zero integral threshold local
82 & more_ints_txs, scr, lscr, zerotol,'der1_int')
87 & num_q, q4, use_q4, zerotol, canonicalize,
106 & num_q, q4, use_q4, zerotol, canonicalize,
140 double precision zerotol !< [Input] zero integral threshold local
245 & zerotol,canonicalize)
261 & zerotol,canonicalize) argument
273 double precision zerotol local
310 if (val_max.gt.zerotol) then
H A Dint_l1eall.F43 subroutine int_l1eall(i_basis, ish, j_basis, jsh, zerotol, argument
69 double precision zerotol !< [Input] zero threshold for integrals
130 nonzero = abs(scr((icount+iscrS))).ge.zerotol
131 nonzero = nonzero .and.(abs(scr((icount+iscrT))).ge.zerotol)
132 nonzero = nonzero .and.(abs(scr((icount+iscrV))).ge.zerotol)
H A Dint_lgen1e.F25 subroutine int_lgen1e(i_basis, ish, j_basis, jsh, zerotol, argument
49 double precision zerotol !< [input] zero threshold local
92 nonzero = abs(scr(icount)).ge.zerotol
H A Dint_l2e2c.F26 & zerotol, leri, eri, nint, ilab, jlab,
56 double precision zerotol !< [Input] zero threshold
98 if (abs(scr(icount)).ge.zerotol) then
H A Dint_l1eh1.F45 subroutine int_l1eh1(i_basis, ish, j_basis, jsh, zerotol, argument
72 double precision zerotol !< [Input] zero threshold
111 nonzero = abs(scr(icount)).ge.zerotol
H A Dint_l1eke.F30 subroutine int_l1eke(i_basis, ish, j_basis, jsh, zerotol, argument
56 double precision zerotol !< [Input] zero threshold
94 nonzero = abs(scr(icount)).ge.zerotol
H A Dint_l1eov.F29 subroutine int_l1eov(i_basis, ish, j_basis, jsh, zerotol, argument
56 double precision zerotol !< [Input] zero threshold
94 nonzero = abs(scr(icount)).ge.zerotol
H A Dint_l1epe.F35 subroutine int_l1epe(i_basis, ish, j_basis, jsh, zerotol, argument
62 double precision zerotol !< [Input] zero integral threshold
101 nonzero = abs(scr(icount)).ge.zerotol
/dports/science/nwchem-data/nwchem-7.0.2-release/src/NWints/api/
H A Dintb_2e4c.F76 $ num_q, q4, use_q4, zerotol, canonicalize,
114 double precision zerotol !< [Input] zero integral threshold local
130 $ num_q, q4, use_q4, zerotol, canonicalize,
141 $ nsp, q4, use_q4, zerotol, canonicalize,
172 $ more_ints_txs, scr, lscr, zerotol,'scfd_int')
213 $ num_q, q4, use_q4, zerotol, canonicalize,
251 double precision zerotol !< [Input] zero integral threshold local
302 $ zerotol, canonicalize, leri_left, eri(ip_int),
H A Dapi.doc15 . int_l2e4c(bra_basis, ish, jsh, ket_basis, ksh, lsh, zerotol,
24 . int_lgen1e (i_basis, ish, j_basis, jsh, zerotol, ilab, jlab, len[S|T|V|H1], [S|T|V|H1], [nums|num…
25 . int_l1eall (i_basis, ish, j_basis, jsh, zerotol, ilab, jlab, S, T, V, numstv)
37 . int_l2e3c (bra_basis, ish, ket_basis, jsh, ksh, zerotol, canket,
43 . int_l2e2c (bra_basis, ish, ket_basis, jsh, zerotol, leri, eri,
50 . int_l1e3ov(i_basis, ish, j_basis, jsh, k_basis, ksh, zerotol,
57 int_lmpole(i_basis, j_basis, Lvalue, ish, jsh, MPINTS, ilab, jlab, zerotol)
H A Dintbdd_2e4c.F27 & num_q, q4, use_q4, zerotol, canonicalize,
62 double precision zerotol !< [Input] zero integral threshold local
82 & more_ints_txs, scr, lscr, zerotol,'der2_int')
116 & num_q, q4, use_q4, zerotol, canonicalize,
150 double precision zerotol !< [Input] zero integral threshold local
246 & zerotol,canonicalize)
262 & zerotol,canonicalize) argument
274 double precision zerotol local
318 if (val_max.gt.zerotol) then
H A Dintbd_2e4c.F28 & num_q, q4, use_q4, zerotol, canonicalize,
62 double precision zerotol !< [Input] zero integral threshold local
82 & more_ints_txs, scr, lscr, zerotol,'der1_int')
87 & num_q, q4, use_q4, zerotol, canonicalize,
106 & num_q, q4, use_q4, zerotol, canonicalize,
140 double precision zerotol !< [Input] zero integral threshold local
245 & zerotol,canonicalize)
261 & zerotol,canonicalize) argument
273 double precision zerotol local
310 if (val_max.gt.zerotol) then
H A Dint_l1eall.F43 subroutine int_l1eall(i_basis, ish, j_basis, jsh, zerotol, argument
69 double precision zerotol !< [Input] zero threshold for integrals
130 nonzero = abs(scr((icount+iscrS))).ge.zerotol
131 nonzero = nonzero .and.(abs(scr((icount+iscrT))).ge.zerotol)
132 nonzero = nonzero .and.(abs(scr((icount+iscrV))).ge.zerotol)
H A Dint_lgen1e.F25 subroutine int_lgen1e(i_basis, ish, j_basis, jsh, zerotol, argument
49 double precision zerotol !< [input] zero threshold
92 nonzero = abs(scr(icount)).ge.zerotol
H A Dint_l2e2c.F26 & zerotol, leri, eri, nint, ilab, jlab,
56 double precision zerotol !< [Input] zero threshold
98 if (abs(scr(icount)).ge.zerotol) then
/dports/science/dakota/dakota-6.13.0-release-public.src-UI/packages/external/trilinos/packages/rol/src/step/
H A DROL_CompositeStep.hpp237 con.value(*cvec_, x, zerotol); in initialize()
240 obj.gradient(*gvec_, x, zerotol); in initialize()
274 f = obj.value(x, zerotol); in compute()
277 obj.gradient(*gf, x, zerotol); in compute()
279 con.value(*c, x, zerotol); in compute()
346 Real val = obj.value(x, zerotol); in update()
348 obj.gradient(*g, x, zerotol); in update()
353 con.value(*c, x, zerotol); in update()
676 obj.hessVec(*gtemp, n, x, zerotol); in solveTangentialSubproblem()
1087 con.applyJacobian(*rt, t, x, zerotol); in accept()
[all …]
H A DROL_InteriorPointStep.hpp181 Real zerotol = 0.0; in initialize() local
183 algo_state.value = obj.value(x,zerotol); in initialize()
185 obj.gradient(*g_,x,zerotol); in initialize()
188 con.value(*c_,x,zerotol); in initialize()
232 algo_state.value = obj.value(x,zerotol); in initialize()
234 obj.gradient(*g_,x,zerotol); in initialize()
369 Real zerotol = 0.0; in update() local
371 algo_state.value = ipobj.value(x,zerotol); in update()
374 ipcon.value(*c_,x,zerotol); in update()
377 ipobj.gradient(*g_,x,zerotol); in update()
[all …]

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