| /dports/archivers/innoextract/innoextract-1.9/src/setup/ |
| H A D | version.cpp | 298 size_t a_end = version_str.find_first_not_of(digits, a_start); in load() local
299 if(a_end == std::string::npos || version_str[a_end] != '.') { in load()
302 unsigned a = util::to_unsigned(version_str.data() + a_start, a_end - a_start); in load()
304 size_t b_start = a_end + 1; in load()
|
| /dports/audio/beets/beets-1.4.9/beets/ui/ |
| H A D | __init__.py | 575 for op, a_start, a_end, b_start, b_end in matcher.get_opcodes():
578 a_out.append(a[a_start:a_end])
585 a_out.append(colorize(highlight, a[a_start:a_end]))
589 if a[a_start:a_end].lower() != b[b_start:b_end].lower():
593 a_out.append(colorize(color, a[a_start:a_end]))
|
| /dports/audio/gnome-podcasts/podcasts-c86f7bfdef7692bbf20f315a90450321f6ca9ce7/cargo-crates/mime-0.3.16/src/ |
| H A D | lib.rs | 333 let a_end = if a_quoted { in params_eq() localVariable
354 if !eq_ascii(&a[..a_end], &b[..b_end]) { in params_eq()
358 if &a[..a_end] != &b[..b_end] { in params_eq()
362 a = &a[a_end..]; in params_eq()
|
| /dports/audio/ncspot/ncspot-0.9.3/cargo-crates/fixedbitset-0.2.0/src/ |
| H A D | lib.rs | 891 let a_end = 59; in bitand_equal_lengths() localVariable
915 let a_end = 97; in bitand_first_smaller() localVariable
939 let a_end = 107; in bitand_first_larger() localVariable
961 let a_end = 59; in intersection() localVariable
1008 let a_end = 79; in difference() localVariable
1028 let a_end = 79; in symmetric_difference() localVariable
1053 let a_end = 23; in bitor_equal_lengths() localVariable
1077 let a_end = 89; in bitor_first_smaller() localVariable
1122 let a_end = 59; in bitxor_equal_lengths() localVariable
1146 let a_end = 97; in bitxor_first_smaller() localVariable
[all …]
|
| /dports/audio/ncspot/ncspot-0.9.3/cargo-crates/mime-0.3.16/src/ |
| H A D | lib.rs | 333 let a_end = if a_quoted {
354 if !eq_ascii(&a[..a_end], &b[..b_end]) {
358 if &a[..a_end] != &b[..b_end] {
362 a = &a[a_end..];
|
| /dports/audio/spotify-tui/spotify-tui-0.25.0/cargo-crates/mime-0.3.16/src/ |
| H A D | lib.rs | 333 let a_end = if a_quoted { in params_eq() localVariable
354 if !eq_ascii(&a[..a_end], &b[..b_end]) { in params_eq()
358 if &a[..a_end] != &b[..b_end] { in params_eq()
362 a = &a[a_end..]; in params_eq()
|
| /dports/audio/spotifyd/spotifyd-0.3.0/cargo-crates/mime-0.3.16/src/ |
| H A D | lib.rs | 333 let a_end = if a_quoted { in params_eq() localVariable
354 if !eq_ascii(&a[..a_end], &b[..b_end]) { in params_eq()
358 if &a[..a_end] != &b[..b_end] { in params_eq()
362 a = &a[a_end..]; in params_eq()
|
| /dports/benchmarks/iorate/iorate-3.05/ |
| H A D | ior_test.c | 1023 area_end = cur_area->a_end + in ior_run_skew()
|
| H A D | iorate.c | 2052 cur_area->a_end = location; /* really -1, but compares are easier */ in ior_skew_set()
|
| H A D | iorate.h | 134 HUGE a_end; /* ending location */ member
|
| /dports/biology/abyss/abyss-2.3.1/ParseAligns/ |
| H A D | ParseAligns.cpp | 245 unsigned a_end = a.read_start_pos + a.align_length - opt::k; in doReadIntegrity()
246 int distance = b.read_start_pos - a_end; in doReadIntegrity()
|
| /dports/biology/canu/canu-2.2/src/correction/ |
| H A D | computeGlobalScore.C | 39 uint32 ovlLength = ovl[oo].a_end() - ovl[oo].a_bgn(); in compute()
|
| H A D | generateCorrectionLayouts.C | 99 … ovl[oo].b_iid, ovl[oo].a_bgn(), ovl[oo].a_end(), ovlLength, ovl[oo].erate(), maxEvidenceErate); in generateLayout()
103 if (ovl[oo].a_end() - ovl[oo].a_bgn() < minEvidenceLength) { in generateLayout()
106 … ovl[oo].b_iid, ovl[oo].a_bgn(), ovl[oo].a_end(), ovlLength, ovl[oo].erate(), minEvidenceLength); in generateLayout()
114 …ovl[oo].b_iid, ovl[oo].a_bgn(), ovl[oo].a_end(), ovlLength, ovl[oo].erate(), ovlScore, olapThresh[… in generateLayout()
121 ovl[oo].b_iid, ovl[oo].a_bgn(), ovl[oo].a_end(), ovlLength, ovl[oo].erate()); in generateLayout()
127 …ovl[oo].b_iid, ovl[oo].a_bgn(), ovl[oo].a_end(), ovlLength, ovl[oo].erate(), ovlScore, olapThresh[… in generateLayout()
139 ovl[oo].a_bgn(), ovl[oo].a_end()); in generateLayout()
146 ovl[oo].a_end(), ovl[oo].a_bgn()); in generateLayout()
|
| /dports/biology/canu/canu-2.2/src/minimap/ |
| H A D | mmapConvert.C | 139 … if (ov.a_end() - ov.a_bgn() < minOverlapLength || ov.b_end() - ov.b_bgn() < minOverlapLength) { in main()
|
| /dports/biology/canu/canu-2.2/src/overlapAlign/ |
| H A D | computeOverlapAlignment.C | 851 …- A %7u %6d-%-6d -> %6d-%-6d\n", _aID, ori.a_bgn(), ori.a_end(), ovl->a_bgn(), ovl->a_end()); in computeOverlapAlignment()
|
| /dports/biology/canu/canu-2.2/src/overlapBasedTrimming/ |
| H A D | adjustFlipped.C | 40 aovlend = ovl->a_end(); in adjustFlipped()
|
| H A D | adjustNormal.C | 36 aovlend = ovl->a_end(); in adjustNormal()
|
| H A D | splitReads-workUnit.C | 93 o->a_iid, o->a_bgn(), o->a_end(), o->b_iid, o->b_bgn(), o->b_end(), in addAndFilterOverlaps()
|
| H A D | trimReads-bestEdge.C | 80 uint32 tend = ovl[i].a_end(); in bestEdge()
190 uint32 tend = ibgn + ovl[i].a_end(); in bestEdge()
263 uint32 tend = ibgn + ovl[i].a_end(); in bestEdge()
|
| H A D | trimReads-largestCovered.C | 54 uint32 tend = ovl[i].a_end(); in largestCovered()
|
| /dports/biology/canu/canu-2.2/src/overlapCheck/ |
| H A D | overlapCheck.C | 230 int32 aend = ovl.a_end(); in compareOverlapKmers()
299 …fprintf(stdout, "OVERLAP A %6u-%6u %6lu/%6lu kmers\n", ovl.a_bgn(), ovl.a_end(), Ain.size(), Aall.… in compareOverlapKmers()
302 ovl.a_iid, ovl.a_bgn(), ovl.a_end(), AbasesLen, in compareOverlapKmers()
|
| /dports/biology/canu/canu-2.2/src/overlapErrorAdjustment/ |
| H A D | correctOverlaps-Redo_Olaps.C | 306 int32 a_end = 0; in ProcessAlignment() local
315 a_end, in ProcessAlignment()
325 all_errors -= TrimStartingIndels(a_part, a_end, ped->delta, ped->deltaLen, 1); in ProcessAlignment()
331 *invalid_olap = (std::min(a_end, b_end) <= 0); in ProcessAlignment()
343 a_end, b_end, check_trivial_dna); in ProcessAlignment()
516 errors, a_end, b_end, match_to_end, olapLen); in Redo_Olaps()
|
| H A D | findErrors-Process_Olap.C | 207 int32 a_end = 0; in Process_Olap() local
220 a_end, in Process_Olap()
225 if ((a_end < 0) || (a_end > a_part_len) || (b_end < 0) || (b_end > b_part_len)) { in Process_Olap()
227 fprintf (stderr, " errors = %d a_end = %d b_end = %d\n", all_errors, a_end, b_end); in Process_Olap()
231 assert(a_end >= 0); in Process_Olap()
232 assert(a_end <= a_part_len); in Process_Olap()
240 if ((match_to_end == false) && (a_end + a_offset >= wa->G->reads[ri].clear_len - 1)) { in Process_Olap()
251 if (match_to_end && a_end > 0 && b_end > 0) { in Process_Olap()
258 a_end, b_end, wa->G->checkTrivialDNA); in Process_Olap()
274 a_part, a_end, a_offset, in Process_Olap()
|
| /dports/biology/canu/canu-2.2/src/overlapInCore/ |
| H A D | overlapPair.C | 600 …tf(stderr, "fini A %7" F_U32P " %6d-%-6d %d %d\n", aID, abgn, aend, ovl->a_bgn(), ovl->a_end()); in recomputeOverlaps()
|
| /dports/biology/canu/canu-2.2/src/stores/ |
| H A D | ovOverlap.C | 48 a_bgn(), a_end(), in toString()
73 g->sqStore_getReadLength(a_iid), a_bgn(), a_end(), in toString()
77 (uint32)floor(span() == 0 ? ((1-erate()) * (a_end()-a_bgn())) : (1-erate()) * span()), in toString()
78 span() == 0 ? a_end() - a_bgn() : span(), in toString()
|