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Searched refs:ambig_list (Results 1 – 25 of 44) sorted by relevance

12

/dports/biology/infernal/infernal-1.1.3/hmmer/src/
H A Dfm_general.c600 fm_initAmbiguityList(meta->ambig_list); in fm_readFMmeta()
611 fread(&(meta->ambig_list->count), sizeof(meta->ambig_list->count), 1, meta->fp) != 1 || in fm_readFMmeta()
648 if (meta->ambig_list->count > meta->ambig_list->size) { in fm_readFMmeta()
649 ESL_REALLOC(meta->ambig_list->ranges, meta->ambig_list->count * sizeof(FM_INTERVAL)); in fm_readFMmeta()
650 if (meta->ambig_list->ranges == NULL ) in fm_readFMmeta()
652 meta->ambig_list->size = meta->ambig_list->count; in fm_readFMmeta()
655 for (i=0; i<meta->ambig_list->count; i++) { in fm_readFMmeta()
700 if ((*cfg)->meta->ambig_list == NULL) in fm_configAlloc()
754 if (meta->ambig_list) { in fm_metaDestroy()
755 if (meta->ambig_list->ranges) free(meta->ambig_list->ranges); in fm_metaDestroy()
[all …]
/dports/biology/hmmer/hmmer-3.3/src/
H A Dfm_general.c600 fm_initAmbiguityList(meta->ambig_list); in fm_readFMmeta()
611 fread(&(meta->ambig_list->count), sizeof(meta->ambig_list->count), 1, meta->fp) != 1 || in fm_readFMmeta()
648 if (meta->ambig_list->count > meta->ambig_list->size) { in fm_readFMmeta()
649 ESL_REALLOC(meta->ambig_list->ranges, meta->ambig_list->count * sizeof(FM_INTERVAL)); in fm_readFMmeta()
650 if (meta->ambig_list->ranges == NULL ) in fm_readFMmeta()
652 meta->ambig_list->size = meta->ambig_list->count; in fm_readFMmeta()
655 for (i=0; i<meta->ambig_list->count; i++) { in fm_readFMmeta()
700 if ((*cfg)->meta->ambig_list == NULL) in fm_configAlloc()
754 if (meta->ambig_list) { in fm_metaDestroy()
755 if (meta->ambig_list->ranges) free(meta->ambig_list->ranges); in fm_metaDestroy()
[all …]
/dports/net-mgmt/monitoring-plugins/monitoring-plugins-2.3.1/gl/
H A Dgetopt.c489 } *ambig_list = NULL; in _getopt_internal_r() local
525 newp->next = ambig_list; in _getopt_internal_r()
526 ambig_list = newp; in _getopt_internal_r()
530 if (ambig_list != NULL && !exact) in _getopt_internal_r()
536 first.next = ambig_list; in _getopt_internal_r()
537 ambig_list = &first; in _getopt_internal_r()
553 ambig_list = ambig_list->next; in _getopt_internal_r()
581 ambig_list = ambig_list->next; in _getopt_internal_r()
594 while (ambig_list != NULL) in _getopt_internal_r()
597 free (ambig_list); in _getopt_internal_r()
[all …]
/dports/devel/idutils/idutils-4.6/lib/
H A Dgetopt.c489 } *ambig_list = NULL; in _getopt_internal_r() local
525 newp->next = ambig_list; in _getopt_internal_r()
526 ambig_list = newp; in _getopt_internal_r()
530 if (ambig_list != NULL && !exact) in _getopt_internal_r()
536 first.next = ambig_list; in _getopt_internal_r()
537 ambig_list = &first; in _getopt_internal_r()
553 ambig_list = ambig_list->next; in _getopt_internal_r()
581 ambig_list = ambig_list->next; in _getopt_internal_r()
594 while (ambig_list != NULL) in _getopt_internal_r()
597 free (ambig_list); in _getopt_internal_r()
[all …]
/dports/misc/amanda-client/amanda-3.3.9/gnulib/
H A Dgetopt.c489 } *ambig_list = NULL; in _getopt_internal_r() local
525 newp->next = ambig_list; in _getopt_internal_r()
526 ambig_list = newp; in _getopt_internal_r()
530 if (ambig_list != NULL && !exact) in _getopt_internal_r()
536 first.next = ambig_list; in _getopt_internal_r()
537 ambig_list = &first; in _getopt_internal_r()
553 ambig_list = ambig_list->next; in _getopt_internal_r()
581 ambig_list = ambig_list->next; in _getopt_internal_r()
594 while (ambig_list != NULL) in _getopt_internal_r()
597 free (ambig_list); in _getopt_internal_r()
[all …]
/dports/misc/amanda-server/amanda-3.3.9/gnulib/
H A Dgetopt.c489 } *ambig_list = NULL; in _getopt_internal_r() local
525 newp->next = ambig_list; in _getopt_internal_r()
526 ambig_list = newp; in _getopt_internal_r()
530 if (ambig_list != NULL && !exact) in _getopt_internal_r()
536 first.next = ambig_list; in _getopt_internal_r()
537 ambig_list = &first; in _getopt_internal_r()
553 ambig_list = ambig_list->next; in _getopt_internal_r()
581 ambig_list = ambig_list->next; in _getopt_internal_r()
594 while (ambig_list != NULL) in _getopt_internal_r()
597 free (ambig_list); in _getopt_internal_r()
[all …]
/dports/games/freedink-engine/freedink-108.4/gnulib/lib/
H A Dgetopt.c489 } *ambig_list = NULL; in _getopt_internal_r() local
525 newp->next = ambig_list; in _getopt_internal_r()
526 ambig_list = newp; in _getopt_internal_r()
530 if (ambig_list != NULL && !exact) in _getopt_internal_r()
536 first.next = ambig_list; in _getopt_internal_r()
537 ambig_list = &first; in _getopt_internal_r()
553 ambig_list = ambig_list->next; in _getopt_internal_r()
581 ambig_list = ambig_list->next; in _getopt_internal_r()
594 while (ambig_list != NULL) in _getopt_internal_r()
597 free (ambig_list); in _getopt_internal_r()
[all …]
/dports/textproc/source-highlight/source-highlight-3.1.9/gl/
H A Dgetopt.c489 } *ambig_list = NULL; in _getopt_internal_r() local
525 newp->next = ambig_list; in _getopt_internal_r()
526 ambig_list = newp; in _getopt_internal_r()
530 if (ambig_list != NULL && !exact) in _getopt_internal_r()
536 first.next = ambig_list; in _getopt_internal_r()
537 ambig_list = &first; in _getopt_internal_r()
553 ambig_list = ambig_list->next; in _getopt_internal_r()
581 ambig_list = ambig_list->next; in _getopt_internal_r()
594 while (ambig_list != NULL) in _getopt_internal_r()
597 free (ambig_list); in _getopt_internal_r()
[all …]
/dports/mail/anubis/anubis-4.2/lib/
H A Dgetopt.c489 } *ambig_list = NULL; in _getopt_internal_r() local
525 newp->next = ambig_list; in _getopt_internal_r()
526 ambig_list = newp; in _getopt_internal_r()
530 if (ambig_list != NULL && !exact) in _getopt_internal_r()
536 first.next = ambig_list; in _getopt_internal_r()
537 ambig_list = &first; in _getopt_internal_r()
553 ambig_list = ambig_list->next; in _getopt_internal_r()
581 ambig_list = ambig_list->next; in _getopt_internal_r()
594 while (ambig_list != NULL) in _getopt_internal_r()
597 free (ambig_list); in _getopt_internal_r()
[all …]
/dports/security/shishi/shishi-1.0.2/src/gl/
H A Dgetopt.c489 } *ambig_list = NULL; in _getopt_internal_r() local
525 newp->next = ambig_list; in _getopt_internal_r()
526 ambig_list = newp; in _getopt_internal_r()
530 if (ambig_list != NULL && !exact) in _getopt_internal_r()
536 first.next = ambig_list; in _getopt_internal_r()
537 ambig_list = &first; in _getopt_internal_r()
553 ambig_list = ambig_list->next; in _getopt_internal_r()
581 ambig_list = ambig_list->next; in _getopt_internal_r()
594 while (ambig_list != NULL) in _getopt_internal_r()
597 free (ambig_list); in _getopt_internal_r()
[all …]
/dports/devel/gnulib/gnulib-20140202-stable/lib/
H A Dgetopt.c489 } *ambig_list = NULL; in _getopt_internal_r() local
525 newp->next = ambig_list; in _getopt_internal_r()
526 ambig_list = newp; in _getopt_internal_r()
530 if (ambig_list != NULL && !exact) in _getopt_internal_r()
536 first.next = ambig_list; in _getopt_internal_r()
537 ambig_list = &first; in _getopt_internal_r()
553 ambig_list = ambig_list->next; in _getopt_internal_r()
581 ambig_list = ambig_list->next; in _getopt_internal_r()
594 while (ambig_list != NULL) in _getopt_internal_r()
597 free (ambig_list); in _getopt_internal_r()
[all …]
/dports/math/4ti2/4ti2-Release_1_6_9/lib/
H A Dgetopt.c489 } *ambig_list = NULL; in _getopt_internal_r() local
525 newp->next = ambig_list; in _getopt_internal_r()
526 ambig_list = newp; in _getopt_internal_r()
530 if (ambig_list != NULL && !exact) in _getopt_internal_r()
536 first.next = ambig_list; in _getopt_internal_r()
537 ambig_list = &first; in _getopt_internal_r()
553 ambig_list = ambig_list->next; in _getopt_internal_r()
581 ambig_list = ambig_list->next; in _getopt_internal_r()
594 while (ambig_list != NULL) in _getopt_internal_r()
597 free (ambig_list); in _getopt_internal_r()
[all …]
/dports/devel/cppi/cppi-1.18/lib/
H A Dgetopt.c489 } *ambig_list = NULL; in _getopt_internal_r() local
525 newp->next = ambig_list; in _getopt_internal_r()
526 ambig_list = newp; in _getopt_internal_r()
530 if (ambig_list != NULL && !exact) in _getopt_internal_r()
536 first.next = ambig_list; in _getopt_internal_r()
537 ambig_list = &first; in _getopt_internal_r()
553 ambig_list = ambig_list->next; in _getopt_internal_r()
581 ambig_list = ambig_list->next; in _getopt_internal_r()
594 while (ambig_list != NULL) in _getopt_internal_r()
597 free (ambig_list); in _getopt_internal_r()
[all …]
/dports/security/gss/gss-1.0.3/src/gl/
H A Dgetopt.c489 } *ambig_list = NULL; in _getopt_internal_r() local
525 newp->next = ambig_list; in _getopt_internal_r()
526 ambig_list = newp; in _getopt_internal_r()
530 if (ambig_list != NULL && !exact) in _getopt_internal_r()
536 first.next = ambig_list; in _getopt_internal_r()
537 ambig_list = &first; in _getopt_internal_r()
553 ambig_list = ambig_list->next; in _getopt_internal_r()
581 ambig_list = ambig_list->next; in _getopt_internal_r()
594 while (ambig_list != NULL) in _getopt_internal_r()
597 free (ambig_list); in _getopt_internal_r()
[all …]
/dports/misc/hello/hello-2.10/lib/
H A Dgetopt.c489 } *ambig_list = NULL; in _getopt_internal_r() local
525 newp->next = ambig_list; in _getopt_internal_r()
526 ambig_list = newp; in _getopt_internal_r()
530 if (ambig_list != NULL && !exact) in _getopt_internal_r()
536 first.next = ambig_list; in _getopt_internal_r()
537 ambig_list = &first; in _getopt_internal_r()
553 ambig_list = ambig_list->next; in _getopt_internal_r()
581 ambig_list = ambig_list->next; in _getopt_internal_r()
594 while (ambig_list != NULL) in _getopt_internal_r()
597 free (ambig_list); in _getopt_internal_r()
[all …]
/dports/textproc/wdiff/wdiff-1.2.2/lib/
H A Dgetopt.c489 } *ambig_list = NULL; in _getopt_internal_r() local
525 newp->next = ambig_list; in _getopt_internal_r()
526 ambig_list = newp; in _getopt_internal_r()
530 if (ambig_list != NULL && !exact) in _getopt_internal_r()
536 first.next = ambig_list; in _getopt_internal_r()
537 ambig_list = &first; in _getopt_internal_r()
553 ambig_list = ambig_list->next; in _getopt_internal_r()
581 ambig_list = ambig_list->next; in _getopt_internal_r()
594 while (ambig_list != NULL) in _getopt_internal_r()
597 free (ambig_list); in _getopt_internal_r()
[all …]
/dports/sysutils/metalog/metalog-3/gnulib/lib/
H A Dgetopt.c489 } *ambig_list = NULL; in _getopt_internal_r() local
525 newp->next = ambig_list; in _getopt_internal_r()
526 ambig_list = newp; in _getopt_internal_r()
530 if (ambig_list != NULL && !exact) in _getopt_internal_r()
536 first.next = ambig_list; in _getopt_internal_r()
537 ambig_list = &first; in _getopt_internal_r()
553 ambig_list = ambig_list->next; in _getopt_internal_r()
581 ambig_list = ambig_list->next; in _getopt_internal_r()
594 while (ambig_list != NULL) in _getopt_internal_r()
597 free (ambig_list); in _getopt_internal_r()
[all …]
/dports/sysutils/renameutils/renameutils-0.12.0/gnulib-lib/
H A Dgetopt.c489 } *ambig_list = NULL; in _getopt_internal_r() local
525 newp->next = ambig_list; in _getopt_internal_r()
526 ambig_list = newp; in _getopt_internal_r()
530 if (ambig_list != NULL && !exact) in _getopt_internal_r()
536 first.next = ambig_list; in _getopt_internal_r()
537 ambig_list = &first; in _getopt_internal_r()
553 ambig_list = ambig_list->next; in _getopt_internal_r()
581 ambig_list = ambig_list->next; in _getopt_internal_r()
594 while (ambig_list != NULL) in _getopt_internal_r()
597 free (ambig_list); in _getopt_internal_r()
[all …]
/dports/archivers/sharutils/sharutils-4.15.2/lib/
H A Dgetopt.c489 } *ambig_list = NULL; in _getopt_internal_r() local
545 ambig_list = NULL; in _getopt_internal_r()
553 ambig_list = newp; in _getopt_internal_r()
560 if (print_errors && ambig_list) in _getopt_internal_r()
564 first.next = ambig_list; in _getopt_internal_r()
565 ambig_list = &first; in _getopt_internal_r()
581 ambig_list = ambig_list->next; in _getopt_internal_r()
609 ambig_list = ambig_list->next; in _getopt_internal_r()
611 while (ambig_list != NULL); in _getopt_internal_r()
625 free_option_list (ambig_list); in _getopt_internal_r()
[all …]
/dports/archivers/gcpio/cpio-2.13/gnu/
H A Dgetopt.c489 } *ambig_list = NULL; in _getopt_internal_r() local
545 ambig_list = NULL; in _getopt_internal_r()
553 ambig_list = newp; in _getopt_internal_r()
560 if (print_errors && ambig_list) in _getopt_internal_r()
564 first.next = ambig_list; in _getopt_internal_r()
565 ambig_list = &first; in _getopt_internal_r()
581 ambig_list = ambig_list->next; in _getopt_internal_r()
609 ambig_list = ambig_list->next; in _getopt_internal_r()
611 while (ambig_list != NULL); in _getopt_internal_r()
625 free_option_list (ambig_list); in _getopt_internal_r()
[all …]
/dports/net-mgmt/nagios-plugins/nagios-plugins-2.3.3/gl/
H A Dgetopt.c489 } *ambig_list = NULL; in _getopt_internal_r() local
545 ambig_list = NULL; in _getopt_internal_r()
553 ambig_list = newp; in _getopt_internal_r()
560 if (print_errors && ambig_list) in _getopt_internal_r()
564 first.next = ambig_list; in _getopt_internal_r()
565 ambig_list = &first; in _getopt_internal_r()
581 ambig_list = ambig_list->next; in _getopt_internal_r()
609 ambig_list = ambig_list->next; in _getopt_internal_r()
611 while (ambig_list != NULL); in _getopt_internal_r()
625 free_option_list (ambig_list); in _getopt_internal_r()
[all …]
/dports/lang/gawk/gawk-5.1.1/support/
H A Dgetopt.c545 } *ambig_list = NULL; in _getopt_internal_r() local
582 newp->next = ambig_list; in _getopt_internal_r()
583 ambig_list = newp; in _getopt_internal_r()
593 first.next = ambig_list; in _getopt_internal_r()
595 ambig_list = &first; in _getopt_internal_r()
611 ambig_list = ambig_list->next; in _getopt_internal_r()
613 while (ambig_list != NULL); in _getopt_internal_r()
641 tmp_next = ambig_list->next; in _getopt_internal_r()
642 if (ambig_list->needs_free) in _getopt_internal_r()
643 free(ambig_list); in _getopt_internal_r()
[all …]
/dports/emulators/yuzu/yuzu-0b47f7a46/externals/getopt/
H A Dgetopt.c197 } *ambig_list = NULL; in _getopt_internal_r_a() local
223 ambig_list = newp; in _getopt_internal_r_a()
226 if (ambig_list != NULL && !exact) in _getopt_internal_r_a()
232 first.next = ambig_list; in _getopt_internal_r_a()
233 ambig_list = &first; in _getopt_internal_r_a()
238 ambig_list = ambig_list->next; in _getopt_internal_r_a()
651 } *ambig_list = NULL; in _getopt_internal_r_w() local
677 ambig_list = newp; in _getopt_internal_r_w()
686 first.next = ambig_list; in _getopt_internal_r_w()
687 ambig_list = &first; in _getopt_internal_r_w()
[all …]
/dports/sysutils/u-boot-imx-serial-loader/imx_usb_loader-ba6b31c/msvc/
H A Dgetopt.c204 } *ambig_list = NULL; in _getopt_internal_r_a() local
229 newp->next = ambig_list; in _getopt_internal_r_a()
230 ambig_list = newp; in _getopt_internal_r_a()
239 first.next = ambig_list; in _getopt_internal_r_a()
240 ambig_list = &first; in _getopt_internal_r_a()
245 ambig_list = ambig_list->next; in _getopt_internal_r_a()
664 } *ambig_list = NULL; in _getopt_internal_r_w() local
689 newp->next = ambig_list; in _getopt_internal_r_w()
690 ambig_list = newp; in _getopt_internal_r_w()
700 ambig_list = &first; in _getopt_internal_r_w()
[all …]
/dports/emulators/citra-qt5/citra-ac98458e0/externals/getopt/
H A Dgetopt.c197 } *ambig_list = NULL; in _getopt_internal_r_a() local
223 ambig_list = newp; in _getopt_internal_r_a()
226 if (ambig_list != NULL && !exact) in _getopt_internal_r_a()
232 first.next = ambig_list; in _getopt_internal_r_a()
233 ambig_list = &first; in _getopt_internal_r_a()
238 ambig_list = ambig_list->next; in _getopt_internal_r_a()
651 } *ambig_list = NULL; in _getopt_internal_r_w() local
677 ambig_list = newp; in _getopt_internal_r_w()
686 first.next = ambig_list; in _getopt_internal_r_w()
687 ambig_list = &first; in _getopt_internal_r_w()
[all …]

12