| /dports/audio/libinstpatch/libinstpatch-1.1.6/libinstpatch/ |
| H A D | IpatchFile.c | 209 file->ref_hash = g_hash_table_new_full(g_direct_hash, g_direct_equal, in ipatch_file_init()
238 g_hash_table_destroy(file->ref_hash); in ipatch_file_finalize()
465 … g_hash_table_insert(file->ref_hash, object, weakref); // !! list takes over weak reference in ipatch_file_ref_from_object()
489 g_hash_table_remove(file->ref_hash, object); in ipatch_file_unref_from_object()
516 retval = g_hash_table_lookup(file->ref_hash, object) != NULL; in ipatch_file_test_ref_object()
577 g_hash_table_iter_init(&iter, file->ref_hash); in ipatch_file_get_refs_by_type()
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| H A D | IpatchFile.h | 72 …GHashTable *ref_hash; /* registered objects referencing this file: objectPtr -> GWeakRef */ member
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| /dports/biology/bedtools/bedtools2-2.30.0/src/utils/htslib/cram/ |
| H A D | sam_header.c | 133 k = kh_put(m_s2i, sh->ref_hash, sh->ref[nref].name, &r); in sam_hdr_update_hashes()
135 kh_val(sh->ref_hash, k) = nref; in sam_hdr_update_hashes()
581 k = kh_get(m_s2i, hdr->ref_hash, ID_value); in sam_hdr_find()
582 return k != kh_end(hdr->ref_hash) in sam_hdr_find()
583 ? hdr->ref[kh_val(hdr->ref_hash, k)].ty in sam_hdr_find()
877 if (!(sh->ref_hash = kh_init(m_s2i))) in sam_hdr_new()
1016 if (hdr->ref_hash) in sam_hdr_free()
1017 kh_destroy(m_s2i, hdr->ref_hash); in sam_hdr_free()
1077 khint_t k = kh_get(m_s2i, hdr->ref_hash, ref); in sam_hdr_name2ref()
1078 return k == kh_end(hdr->ref_hash) ? -1 : kh_val(hdr->ref_hash, k); in sam_hdr_name2ref()
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| H A D | sam_header.h | 194 khash_t(m_s2i) *ref_hash; //!< Maps SQ SN field to sq[] index
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| /dports/biology/freebayes/freebayes-1.3.5/contrib/htslib/ |
| H A D | header.c | 104 kh_val(hrecs->ref_hash, k) = nref; in sam_hrecs_add_ref_altnames()
124 if (k != kh_end(hrecs->ref_hash) in sam_hrecs_remove_ref_altnames()
127 kh_del(m_s2i, hrecs->ref_hash, k); in sam_hrecs_remove_ref_altnames()
178 if (k < kh_end(hrecs->ref_hash)) { in sam_hrecs_update_hashes()
179 nref = kh_val(hrecs->ref_hash, k); in sam_hrecs_update_hashes()
251 kh_val(hrecs->ref_hash, k) = nref; in sam_hrecs_update_hashes()
1070 if (k < kh_end(hrecs->ref_hash)) kh_del(m_s2i, hrecs->ref_hash, k); in sam_hrecs_refs_from_targets_array()
1978 if (!hrecs->ref_hash) in sam_hdr_name2tid()
1982 return k == kh_end(hrecs->ref_hash) ? -1 : kh_val(hrecs->ref_hash, k); in sam_hdr_name2tid()
2380 if (hrecs->ref_hash) in sam_hrecs_free()
[all …]
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| H A D | header.h | 193 khash_t(m_s2i) *ref_hash; //!< Maps SQ SN field to ref[] index
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| /dports/biology/htslib/htslib-1.14/ |
| H A D | header.c | 104 kh_val(hrecs->ref_hash, k) = nref; in sam_hrecs_add_ref_altnames()
124 if (k != kh_end(hrecs->ref_hash) in sam_hrecs_remove_ref_altnames()
127 kh_del(m_s2i, hrecs->ref_hash, k); in sam_hrecs_remove_ref_altnames()
178 if (k < kh_end(hrecs->ref_hash)) { in sam_hrecs_update_hashes()
179 nref = kh_val(hrecs->ref_hash, k); in sam_hrecs_update_hashes()
251 kh_val(hrecs->ref_hash, k) = nref; in sam_hrecs_update_hashes()
1075 if (k < kh_end(hrecs->ref_hash)) kh_del(m_s2i, hrecs->ref_hash, k); in sam_hrecs_refs_from_targets_array()
1983 if (!hrecs->ref_hash) in sam_hdr_name2tid()
1987 return k == kh_end(hrecs->ref_hash) ? -1 : kh_val(hrecs->ref_hash, k); in sam_hdr_name2tid()
2385 if (hrecs->ref_hash) in sam_hrecs_free()
[all …]
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| H A D | header.h | 193 khash_t(m_s2i) *ref_hash; //!< Maps SQ SN field to ref[] index
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| /dports/biology/iolib/io_lib-io_lib-1-14-10/io_lib/ |
| H A D | bam.c | 1307 hi = HashTableSearch(b->header->ref_hash, (char *)cp, cpf-cp); in sam_next_seq()
1326 hi = HashTableAdd(sh->ref_hash, sh->ref[sh->nref].name, 0, in sam_next_seq()
1409 hi = HashTableSearch(sh->ref_hash, (char *)cp, cpf-cp); in sam_next_seq()
1427 hi = HashTableAdd(sh->ref_hash, sh->ref[sh->nref].name, 0, in sam_next_seq()
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| H A D | sam_header.c | 140 if (!HashTableAdd(sh->ref_hash, sh->ref[nref].name, 0, hd, NULL)) in sam_hdr_update_hashes()
587 hi = HashTableSearch(hdr->ref_hash, ID_value, strlen(ID_value)); in sam_hdr_find()
893 if (!(sh->ref_hash = HashTableCreate(16, HASH_FUNC_HSIEH | in sam_hdr_new()
1045 if (hdr->ref_hash) in sam_hdr_free()
1046 HashTableDestroy(hdr->ref_hash, 0); in sam_hdr_free()
1106 HashItem *hi = HashTableSearch(hdr->ref_hash, ref, strlen(ref)); in sam_hdr_name2ref()
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| H A D | sam_header.h | 195 HashTable *ref_hash; //!< Hash table indexed by SN: field member
|
| /dports/biology/kallisto/kallisto-0.46.1/ext/htslib/cram/ |
| H A D | sam_header.c | 132 k = kh_put(m_s2i, sh->ref_hash, sh->ref[nref].name, &r); in sam_hdr_update_hashes()
134 kh_val(sh->ref_hash, k) = nref; in sam_hdr_update_hashes()
580 k = kh_get(m_s2i, hdr->ref_hash, ID_value); in sam_hdr_find()
581 return k != kh_end(hdr->ref_hash) in sam_hdr_find()
582 ? hdr->ref[kh_val(hdr->ref_hash, k)].ty in sam_hdr_find()
877 if (!(sh->ref_hash = kh_init(m_s2i))) in sam_hdr_new()
1016 if (hdr->ref_hash) in sam_hdr_free()
1017 kh_destroy(m_s2i, hdr->ref_hash); in sam_hdr_free()
1077 khint_t k = kh_get(m_s2i, hdr->ref_hash, ref); in sam_hdr_name2ref()
1078 return k == kh_end(hdr->ref_hash) ? -1 : kh_val(hdr->ref_hash, k); in sam_hdr_name2ref()
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| H A D | sam_header.h | 194 khash_t(m_s2i) *ref_hash; //!< Maps SQ SN field to sq[] index
|
| /dports/biology/py-pysam/pysam-0.18.0/htslib/ |
| H A D | header.c | 104 kh_val(hrecs->ref_hash, k) = nref; in sam_hrecs_add_ref_altnames()
124 if (k != kh_end(hrecs->ref_hash) in sam_hrecs_remove_ref_altnames()
127 kh_del(m_s2i, hrecs->ref_hash, k); in sam_hrecs_remove_ref_altnames()
178 if (k < kh_end(hrecs->ref_hash)) { in sam_hrecs_update_hashes()
179 nref = kh_val(hrecs->ref_hash, k); in sam_hrecs_update_hashes()
251 kh_val(hrecs->ref_hash, k) = nref; in sam_hrecs_update_hashes()
1075 if (k < kh_end(hrecs->ref_hash)) kh_del(m_s2i, hrecs->ref_hash, k); in sam_hrecs_refs_from_targets_array()
1983 if (!hrecs->ref_hash) in sam_hdr_name2tid()
1987 return k == kh_end(hrecs->ref_hash) ? -1 : kh_val(hrecs->ref_hash, k); in sam_hdr_name2tid()
2385 if (hrecs->ref_hash) in sam_hrecs_free()
[all …]
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| H A D | header.h | 193 khash_t(m_s2i) *ref_hash; //!< Maps SQ SN field to ref[] index
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| /dports/biology/stacks/stacks-2.4/htslib/cram/ |
| H A D | sam_header.c | 133 k = kh_put(m_s2i, sh->ref_hash, sh->ref[nref].name, &r); in sam_hdr_update_hashes()
135 kh_val(sh->ref_hash, k) = nref; in sam_hdr_update_hashes()
581 k = kh_get(m_s2i, hdr->ref_hash, ID_value); in sam_hdr_find()
582 return k != kh_end(hdr->ref_hash) in sam_hdr_find()
583 ? hdr->ref[kh_val(hdr->ref_hash, k)].ty in sam_hdr_find()
877 if (!(sh->ref_hash = kh_init(m_s2i))) in sam_hdr_new()
1016 if (hdr->ref_hash) in sam_hdr_free()
1017 kh_destroy(m_s2i, hdr->ref_hash); in sam_hdr_free()
1077 khint_t k = kh_get(m_s2i, hdr->ref_hash, ref); in sam_hdr_name2ref()
1078 return k == kh_end(hdr->ref_hash) ? -1 : kh_val(hdr->ref_hash, k); in sam_hdr_name2ref()
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| H A D | sam_header.h | 194 khash_t(m_s2i) *ref_hash; //!< Maps SQ SN field to sq[] index
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| /dports/biology/vt/vt-0.57721/lib/htslib/cram/ |
| H A D | sam_header.c | 133 k = kh_put(m_s2i, sh->ref_hash, sh->ref[nref].name, &r); in sam_hdr_update_hashes()
135 kh_val(sh->ref_hash, k) = nref; in sam_hdr_update_hashes()
581 k = kh_get(m_s2i, hdr->ref_hash, ID_value); in sam_hdr_find()
582 return k != kh_end(hdr->ref_hash) in sam_hdr_find()
583 ? hdr->ref[kh_val(hdr->ref_hash, k)].ty in sam_hdr_find()
877 if (!(sh->ref_hash = kh_init(m_s2i))) in sam_hdr_new()
1016 if (hdr->ref_hash) in sam_hdr_free()
1017 kh_destroy(m_s2i, hdr->ref_hash); in sam_hdr_free()
1077 khint_t k = kh_get(m_s2i, hdr->ref_hash, ref); in sam_hdr_name2ref()
1078 return k == kh_end(hdr->ref_hash) ? -1 : kh_val(hdr->ref_hash, k); in sam_hdr_name2ref()
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| H A D | sam_header.h | 194 khash_t(m_s2i) *ref_hash; //!< Maps SQ SN field to sq[] index
|
| /dports/converters/p5-Storable-AMF/Storable-AMF-1.00/ |
| H A D | AMF.xs | 2539 HV *ref_hash = (HV *) ref_addr; in ref_clear() local
2544 hv_iterinit(ref_hash); in ref_clear()
2545 while( (item = hv_iternextsv(ref_hash, &key, &key_len)) ){ in ref_clear()
2548 hv_clear(ref_hash); in ref_clear()
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| /dports/databases/evolution-data-server/evolution-data-server-3.42.1/src/camel/ |
| H A D | camel-db.c | 1483 read_uids_to_hash_callback (gpointer ref_hash, in read_uids_to_hash_callback() argument
1488 GHashTable *hash = ref_hash; in read_uids_to_hash_callback()
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| /dports/databases/pgbarman/barman-release-2.17/barman/ |
| H A D | copy_controller.py | 873 ref_hash = {}
881 ref_hash[file_item.path] = file_item
887 ref_hash = None
944 if ref_hash is None:
951 dst_item = ref_hash.get(entry.path, None)
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| /dports/devel/arcanist-lib/arcanist-b2e715f/src/land/engine/ |
| H A D | ArcanistGitLandEngine.php | 89 $ref_hash = $parts[1];
104 $result[$matches[1]] = $ref_hash;
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| /dports/devel/arcanist/arcanist-b2e715f/src/land/engine/ |
| H A D | ArcanistGitLandEngine.php | 89 $ref_hash = $parts[1];
104 $result[$matches[1]] = $ref_hash;
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| /dports/devel/buildstream/BuildStream-1.2.8/buildstream/_artifactcache/ |
| H A D | cascache.py | 557 ref_name, ref_hash = os.path.split(ref)
565 if other_hash == ref_hash:
|