/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/sample/app/lds/ |
H A D | lds2_sample.cpp | 204 sel.SetByProduct(true); in Run() 217 sel.SetByProduct(false); in Run()
|
/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/sra/data_loaders/wgs/test/ |
H A D | test_wgs_loader.cpp | 1745 CFeat_CI feat_it(bsh, SAnnotSelector().SetByProduct()); in BOOST_AUTO_TEST_CASE() 1778 CFeat_CI feat_it(bsh, SAnnotSelector().SetByProduct()); in BOOST_AUTO_TEST_CASE() 1812 CFeat_CI feat_it(bsh, SAnnotSelector().SetByProduct()); in BOOST_AUTO_TEST_CASE() 1845 CFeat_CI feat_it(bsh, SAnnotSelector().SetByProduct()); in BOOST_AUTO_TEST_CASE() 1880 CFeat_CI feat_it(bsh, SAnnotSelector().SetByProduct()); in BOOST_AUTO_TEST_CASE() 1914 CFeat_CI feat_it(bsh, SAnnotSelector().SetByProduct()); in BOOST_AUTO_TEST_CASE() 1951 CFeat_CI feat_it(bsh, SAnnotSelector().SetByProduct()); in BOOST_AUTO_TEST_CASE() 1985 CFeat_CI feat_it(bsh, SAnnotSelector().SetByProduct()); in BOOST_AUTO_TEST_CASE() 2021 CFeat_CI feat_it(bsh, SAnnotSelector().SetByProduct()); in BOOST_AUTO_TEST_CASE() 2051 CFeat_CI feat_it(bsh, SAnnotSelector().SetByProduct()); in BOOST_AUTO_TEST_CASE() [all …]
|
/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/objtools/data_loaders/lds2/test/ |
H A D | test_lds2.cpp | 396 sel.SetByProduct(true); in Main() 552 sel.SetByProduct(true); in Run() 561 sel.SetByProduct(false); in Run()
|
/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/objtools/validator/ |
H A D | validerror_bioseqset.cpp | 210 .SetByProduct()); in IsMrnaProductInGPS() 225 sel.SetByProduct(true); in IsCDSProductInGPS()
|
H A D | validatorp.cpp | 2365 sel.SetByProduct() in GetCDSGivenProduct() 2375 sel.SetByProduct(); in GetCDSGivenProduct() 2406 sel.SetByProduct() .SetLimitTSE(limit); in GetmRNAGivenProduct() 2415 sel.SetByProduct(); in GetmRNAGivenProduct()
|
/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/objtools/test/objmgr/ |
H A D | test_annot_ci.cpp | 337 sel.SetByProduct(); in x_InitSelector()
|
/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/include/objmgr/ |
H A D | annot_selector.hpp | 191 SAnnotSelector& SetByProduct(bool byProduct = true) in SetByProduct() function
|
/dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/include/objmgr/ |
H A D | annot_selector.hpp | 191 SAnnotSelector& SetByProduct(bool byProduct = true) in SetByProduct() function
|
/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/objmgr/test/ |
H A D | test_helper.cpp | 1216 for ( CFeat_CI feat_it(scope, loc, SAnnotSelector().SetByProduct()); in ProcessBioseq() 1254 .SetByProduct()); in ProcessBioseq()
|
/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/objmgr/util/ |
H A D | indexer.cpp | 2259 .SetByProduct().SetLimitTSE(m_Bsh.GetTSE_Handle())); in GetFeatureForProduct() 2263 .SetByProduct().SetLimitTSE(m_Bsh.GetTSE_Handle())); in GetFeatureForProduct() 2268 .SetByProduct().SetLimitTSE(m_Bsh.GetTSE_Handle())); in GetFeatureForProduct()
|
H A D | sequence.cpp | 2463 .SetByProduct().SetLimitTSE(bsh.GetTSE_Handle())); in GetMappedCDSForProduct() 2468 .SetByProduct().ExcludeTSE(bsh.GetTSE_Handle())); in GetMappedCDSForProduct() 2494 CFeat_CI fi(bsh, SAnnotSelector(CSeqFeatData::e_Prot).SetByProduct()); in GetPROTForProduct() 2519 as.SetByProduct(); in GetmRNAForProduct() 2536 .SetByProduct()); in GetMappedmRNAForProduct()
|
H A D | feature.cpp | 1575 sel.SetByProduct(link.m_ByProduct); in sx_GetParentByOverlap()
|
/dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/src/objmgr/util/ |
H A D | indexer.cpp | 2238 .SetByProduct().SetLimitTSE(m_Bsh.GetTSE_Handle())); in GetFeatureForProduct() 2242 .SetByProduct().SetLimitTSE(m_Bsh.GetTSE_Handle())); in GetFeatureForProduct() 2247 .SetByProduct().SetLimitTSE(m_Bsh.GetTSE_Handle())); in GetFeatureForProduct()
|
H A D | sequence.cpp | 2463 .SetByProduct().SetLimitTSE(bsh.GetTSE_Handle())); in GetMappedCDSForProduct() 2468 .SetByProduct().ExcludeTSE(bsh.GetTSE_Handle())); in GetMappedCDSForProduct() 2494 CFeat_CI fi(bsh, SAnnotSelector(CSeqFeatData::e_Prot).SetByProduct()); in GetPROTForProduct() 2519 as.SetByProduct(); in GetmRNAForProduct() 2536 .SetByProduct()); in GetMappedmRNAForProduct()
|
H A D | feature.cpp | 1575 sel.SetByProduct(link.m_ByProduct); in sx_GetParentByOverlap()
|
/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/objtools/format/ |
H A D | gather_items.cpp | 3984 sel.SetByProduct().SetResolveDepth(0); in x_GatherFeaturesIdx() 4116 sel.SetByProduct().SetResolveDepth(0); in x_GatherFeatures()
|
/dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/src/objtools/format/ |
H A D | gather_items.cpp | 3984 sel.SetByProduct().SetResolveDepth(0); in x_GatherFeaturesIdx() 4116 sel.SetByProduct().SetResolveDepth(0); in x_GatherFeatures()
|
/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/app/objmgr/demo/ |
H A D | objmgr_demo.cpp | 1842 base_sel.SetByProduct(by_product); in Run()
|