Searched refs:qry_removed (Results 1 – 3 of 3) sorted by relevance
355 qry_removed += ref_remove; in bam_trim_left()358 qry_removed = rec->core.l_qseq; in bam_trim_left()369 if (qry_removed > 0) { in bam_trim_left()395 if ((qry_removed & 1) == 0) { in bam_trim_left()416 rec_out->core.l_qseq -= qry_removed; in bam_trim_left()498 qry_removed += ref_remove; in bam_trim_right()501 if (qry_removed > 0) j++; in bam_trim_right()504 qry_removed = rec->core.l_qseq; in bam_trim_right()517 if (qry_removed > 0) --j; in bam_trim_right()519 if (qry_removed > 0) { in bam_trim_right()[all …]
357 qry_removed += ref_remove; in bam_trim_left()360 qry_removed = rec->core.l_qseq; in bam_trim_left()371 if (qry_removed > 0) { in bam_trim_left()397 if ((qry_removed & 1) == 0) { in bam_trim_left()418 rec_out->core.l_qseq -= qry_removed; in bam_trim_left()500 qry_removed += ref_remove; in bam_trim_right()503 if (qry_removed > 0) j++; in bam_trim_right()506 qry_removed = rec->core.l_qseq; in bam_trim_right()519 if (qry_removed > 0) --j; in bam_trim_right()521 if (qry_removed > 0) { in bam_trim_right()[all …]