1 2<a name="input.1"></a> 3<h3>Input files for usage example </h3> 4 5'tembl:AF129756' is a sequence entry in the example nucleic acid database 'tembl' 6<p> 7<p><h3>Database entry: tembl:AF129756</h3> 8<table width="90%"><tr><td bgcolor="#FFCCFF"> 9<pre> 10ID AF129756; SV 1; linear; genomic DNA; STD; HUM; 184666 BP. 11XX 12AC AF129756; 13XX 14DT 12-MAR-1999 (Rel. 59, Created) 15DT 14-NOV-2006 (Rel. 89, Last updated, Version 5) 16XX 17DE Homo sapiens MSH55 gene, partial cds; and CLIC1, DDAH, G6b, G6c, G5b, G6d, 18DE G6e, G6f, BAT5, G5b, CSK2B, BAT4, G4, Apo M, BAT3, BAT2, AIF-1, 1C7, LST-1, 19DE LTB, TNF, and LTA genes, complete cds. 20XX 21KW . 22XX 23OS Homo sapiens (human) 24OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; 25OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; 26OC Homo. 27XX 28RN [1] 29RP 1-184666 30RX DOI; 10.1101/gr.1736803. 31RX PUBMED; 14656967. 32RA Xie T., Rowen L., Aguado B., Ahearn M.E., Madan A., Qin S., Campbell R.D., 33RA Hood L.; 34RT "Analysis of the gene-dense major histocompatibility complex class III 35RT region and its comparison to mouse"; 36RL Genome Res. 13(12):2621-2636(2003). 37XX 38RN [2] 39RP 1-184666 40RA Rowen L., Madan A., Qin S., Shaffer T., James R., Ratcliffe A., Abbasi N., 41RA Dickhoff R., Loretz C., Madan A., Dors M., Young J., Lasky S., Hood L.; 42RT "Sequence of the human major histocompatibility complex class III region"; 43RL Unpublished. 44XX 45RN [3] 46RP 1-184666 47RA Rowen L.; 48RT ; 49RL Submitted (22-FEB-1999) to the INSDC. 50RL Department of Molecular Biotechnology, Box 357730 University of Washington, 51RL Seattle, WA 98195, USA 52XX 53RN [4] 54RP 1-184666 55RA Rowen L.; 56RT ; 57RL Submitted (28-OCT-1999) to the INSDC. 58RL Multimegabase Sequencing Center, University of Washington, PO Box 357730, 59RL Seattle, WA 98195, USA 60 61 62<font color=red> [Part of this file has been deleted for brevity]</font> 63 64 aaaccagttt accaccactc ctaacactaa acttaaatct gactctaaat gtaagtccaa 181740 65 tctgagccac aagcctaaag ttgaacttta tcctgcttta tgaattattc atccattcct 181800 66 ccatttagtg agtatctgcg tgcctaacac atgctgggca ttgtcctaag gcaggaggga 181860 67 catggaggca aagggatcag agaaggtacc agcacctgtg gagcttgtat tccagtgagg 181920 68 ccagacggaa aagaaagaaa ctgaagaaga aattggtact atgagaaaat aagacaggct 181980 69 gatgttgtaa gagtggcagg gagctacttt taaatacagt agtcagcaaa atcctctttg 182040 70 agtgtttggg tggcactgga gctgagaccc aaatgacaaa aaatagtgac caggtaaaag 182100 71 tttgggagca aagcatttca ggtaaaggga gcagctactg caaaggctgg aaggcggaac 182160 72 caagctgggg gtgttgacga caaacagaag gccagtgtgg ctggagcaga gagagagact 182220 73 gggaggcggg tgggagatga ggtcagagag gagggcaggg gccaggtcat gcagggccat 182280 74 gcaagaaggg taaagcctct agatttcatc cagccacagg aagcctttaa aggtcgtcag 182340 75 agtgtgtggt gcgtgcgtgt gtgtgtgtgt gtgtgtgtgt gttgcagggg agagaggggg 182400 76 agggagagag agagagagag agagaagagg gaggtgagca gaggtgattg gatttttttt 182460 77 tcttttgaca tggtgtcttg ctctgtggcc taggctggag tgcagtggca ccatcatagc 182520 78 ccactgcaac ctcaaaacca tgggctcaag tcatccttcc acctcagctt cccaagtatc 182580 79 taggactaca ggtgtgtgcc actgtgcctg gctaatttta aaaaatattt taaaattttt 182640 80 gttgagacag ggtctatgct gctcaggctg gtctcgaact cctggtttca agtgatctgc 182700 81 ccatcttggc ctcccaaagt ttttttttgt tagtttgaga ggcggtttcg ctcgttgccc 182760 82 aggctggagt gcaatgactg atctcatctc actgcaacct ctgcctcctg ggttcaagcg 182820 83 attctcctgc ttcagcctcc caagtagctg ggattacagg tgcatgccac cattcccggc 182880 84 taattttttg tatttagtag agatggggtt tcaccatgtt agtcaggctg atctcaaact 182940 85 cctgacctca ggtgatccgc ctgcctcagc ctcccaaagt tttgggatta caggtgtgag 183000 86 ccaccatgct gggccagcct cccaaagttt tgggattaca ggcatgagtc accacactgg 183060 87 ccctggattt tttttctttc ttttttttgg agacggagtc tcactctgtt gcccaggctg 183120 88 gagtgcaatg gcgtaatctc agctcactgc aacctctgct gcccgggttc aaacgattct 183180 89 cctgtcttag cctcctgagt agctgggatt ataggtgcat gccaccatgc ctggctaatt 183240 90 tttgtacttt tagtagagaa agtacaccat cttggccagg ctggtctcga actcctgacc 183300 91 tcaggtgatc cacttgcgtc ggcctcccaa agtgctggga ttacaggcgt gagacaccgc 183360 92 acccagcctt tttttttttt tttcttttaa gacagaatcg ctctgtcacc caggctggag 183420 93 tgcagtggca caatctcggc tcactgcaac ctctgcctcc caggtttaag caatccacct 183480 94 atgtcagtct cccaagtagc tgggattata ggtgcatgtc accatgcctg gctaattttt 183540 95 gtacttttag tatagaaagt acaccatgtt ggccaggctg gtcttgaact cctgacctca 183600 96 agtgatccgc ctgcctcagc ctcccgaagt gctggaatta cagacatgtg ccactgcacc 183660 97 cggcctggtt ttttttttct aagagatgga gtctcacttt tctgcccagg ttggagtgca 183720 98 atggcaccat catagctcac tgcagccttc aactcttggc ctcaggcaat ccttgcacct 183780 99 tagcctcgca gtgttgggat tacaggcatg agccactgag ccttgcctgg actttttttt 183840 100 ttttttgaga tggcgtctcg ctctgttgcc caggttggag tgctacggca tgatcttggc 183900 101 tcactgcaac ttccacctcc caggttcaag cgattctctt gcctcggccc cccgagtagc 183960 102 tgggattaca ggcatgcgcc accgtgcctg gctaattttg gtatttttag tagagatagg 184020 103 gtttcatcat gttgggcagg ctggtcttga actcctgacc tcgtgatcca cccacctcgg 184080 104 cctcccaaag tgctgggatt ataggcatag ccaacgcgcc cagcctggac ttgtttttaa 184140 105 aagatcactg tggctcctgt gtttaggctg gctggtagga gacaggtggc agtggcattg 184200 106 atggtgaaga gaaaatagtg gcagccatgg agatggagag aagtagacaa gtttgggata 184260 107 tattatacat tccaggggta gaaacaacag gactagatga tggattgatg ggtgggagat 184320 108 gtagatactg ggagagaagc aggattctga tggatggaaa aactaaaaaa ttctattttg 184380 109 ggtgtggtaa gtctaagtct attagacatg caagtagaga tgtcactggg cagatacaca 184440 110 tctggatttc aggggcaagg tccaagctag agaaagaaac ctgggcatgg tcagcatgag 184500 111 gatggtgttt aaagccatgg aacttatctt gtgcatccct ataagacccc tttgaggcac 184560 112 ttgtttcccc tcacaatgga tgcagtgcat cttccattct gaattccaga ggcaacaacc 184620 113 tcctgctcct agaagctaaa ctctccagac ttagtcttct gaattc 184666 114// 115</pre> 116</td></tr></table><p> 117