1 #ifndef __MUTATIONMODEL 2 #define __MUTATIONMODEL 3 #include "migration.h" 4 #include "sighandler.h" 5 /* 6 7 (c) Peter Beerli 2013 Tallahassee FL 8 9 Permission is hereby granted, free of charge, to any person obtaining 10 a copy of this software and associated documentation files (the 11 "Software"), to deal in the Software without restriction, including 12 without limitation the rights to use, copy, modify, merge, publish, 13 distribute, sublicense, and/or sell copies of the Software, and to 14 permit persons to whom the Software is furnished to do so, subject 15 to the following conditions: 16 17 The above copyright notice and this permission notice shall be 18 included in all copies or substantial portions of the Software. 19 20 THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, 21 EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF 22 MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. 23 IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR 24 ANY CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION OF 25 CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION 26 WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE. 27 */ 28 29 /// 30 /// initialize the mutation model structure 31 extern void init_mutationmodel(world_fmt *world, data_fmt *data, option_fmt *options); 32 extern void finish_mutationmodel(world_fmt *world, data_fmt *data, option_fmt *options); 33 extern void print_mutationrate_weights(FILE *file, MYREAL *murates, long *segregs, MYREAL *wattersons, long loci); 34 #endif 35