1<multi-test>
2    <remove-temp-dir url="bwa-mem5"/>
3    <create-temp-dir url="bwa-mem5"/>
4    <run-cmdline
5            task="!common_data_dir!bwa/workflow/bwa-mem.uwl"
6            in="!common_data_dir!reads/e_coli_1000.fa"
7            out_dir="!tmp_data_dir!bwa-mem5"
8            ref="!common_data_dir!bwa/index/ecoli.fa.gb"
9    />
10    <compare-sam-by-length file1="bwa-mem5/bwa/out.sam" file2="bwa/pattern/e_coli_1000_MEM.sam"/>
11    <remove-temp-dir url="bwa-mem5"/>
12</multi-test>
13