FastMarching/test/itkFastMarchingTest2.cxx

/*=========================================================================
 *
 *  Copyright Insight Software Consortium
 *
 *  Licensed under the Apache License, Version 2.0 (the "License");
 *  you may not use this file except in compliance with the License.
 *  You may obtain a copy of the License at
 *
 *         http://www.apache.org/licenses/LICENSE-2.0.txt
 *
 *  Unless required by applicable law or agreed to in writing, software
 *  distributed under the License is distributed on an "AS IS" BASIS,
 *  WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
 *  See the License for the specific language governing permissions and
 *  limitations under the License.
 *
 *=========================================================================*/

#include "itkFastMarchingImageFilter.h"
#include "itkImageRegionIteratorWithIndex.h"
#include "itkTextOutput.h"
#include "itkCommand.h"


namespace{
// The following class is used to support callbacks
// on the filter in the pipeline that follows later
class ShowProgressObject
{
public:
  ShowProgressObject(itk::ProcessObject* o)
    {m_Process = o;}
  void ShowProgress()
    {std::cout << "Progress " << m_Process->GetProgress() << std::endl;}
  itk::ProcessObject::Pointer m_Process;
};
}

int itkFastMarchingTest2(int, char* [] )
{

  itk::OutputWindow::SetInstance(itk::TextOutput::New().GetPointer());

  // create a fastmarching object
  using PixelType = float;
  using FloatImage = itk::Image<PixelType,2>;
  using FloatFMType = itk::FastMarchingImageFilter<FloatImage,FloatImage>;

  FloatFMType::Pointer marcher = FloatFMType::New();

  ShowProgressObject progressWatch(marcher);
  itk::SimpleMemberCommand<ShowProgressObject>::Pointer command;
  command = itk::SimpleMemberCommand<ShowProgressObject>::New();
  command->SetCallbackFunction(&progressWatch,
                               &ShowProgressObject::ShowProgress);
  marcher->AddObserver( itk::ProgressEvent(), command);

  using NodeType = FloatFMType::NodeType;
  using NodeContainer = FloatFMType::NodeContainer;

  // setup alive points
  NodeContainer::Pointer alivePoints = NodeContainer::New();

  NodeType node;

  FloatImage::OffsetType offset0 = {{28,35}};

  itk::Index<2> index;
  index.Fill(0);

  node.SetValue( 0.0 );
  node.SetIndex( index + offset0 );
  alivePoints->InsertElement(0, node);

  node.SetValue( 42.0 );
  index.Fill( 200 );
  node.SetIndex( index ); // this node is out of range
  alivePoints->InsertElement(1, node);

  marcher->SetAlivePoints( alivePoints );


  // setup trial points
  NodeContainer::Pointer trialPoints = NodeContainer::New();

  node.SetValue( 1.0 );

  index.Fill(0);
  index += offset0;

  index[0] += 1;
  node.SetIndex( index );
  trialPoints->InsertElement(0, node);

  index[0] -= 1;
  index[1] += 1;
  node.SetIndex( index );
  trialPoints->InsertElement(1, node);

  index[0] -= 1;
  index[1] -= 1;
  node.SetIndex( index );
  trialPoints->InsertElement(2, node);

  index[0] += 1;
  index[1] -= 1;
  node.SetIndex( index );
  trialPoints->InsertElement(3, node);

  node.SetValue( 42.0 );
  index.Fill( 300 ); // this node is out of range
  node.SetIndex( index );
  trialPoints->InsertElement(4, node);

  marcher->SetTrialPoints( trialPoints );

  // specify the size of the output image
  FloatImage::SizeType size = {{64,64}};
  marcher->SetOutputSize( size );

  // setup a speed image of ones
  FloatImage::Pointer speedImage = FloatImage::New();
  FloatImage::RegionType region;
  region.SetSize( size );
  speedImage->SetLargestPossibleRegion( region );
  speedImage->SetBufferedRegion( region );
  speedImage->Allocate();

  // setup a binary mask image in float (to make sure it works with float)
  FloatImage::Pointer MaskImage = FloatImage::New();
  MaskImage->SetLargestPossibleRegion( region );
  MaskImage->SetBufferedRegion( region );
  MaskImage->Allocate();

  itk::ImageRegionIterator<FloatImage>
    speedIter( speedImage, speedImage->GetBufferedRegion() );
  itk::ImageRegionIteratorWithIndex<FloatImage>
    maskIter( MaskImage, MaskImage->GetBufferedRegion() );
  while ( !speedIter.IsAtEnd() )
    {
    speedIter.Set( 1.0 );
    FloatImage::IndexType idx = maskIter.GetIndex();
    if( ( ( idx[0] > 22 ) && ( idx [0] < 42 ) && ( idx[1] > 27 ) && ( idx[1] < 37 ) ) ||
        ( ( idx[1] > 22 ) && ( idx [1] < 42 ) && ( idx[0] > 27 ) && ( idx[0] < 37 ) ) )
      {
      maskIter.Set( 1.0 );
      }
    else
      {
      maskIter.Set( 0.0 );
      }

    ++maskIter;
    ++speedIter;
    }

  speedImage->Print( std::cout );
  marcher->SetInput( speedImage );
  marcher->SetBinaryMask( MaskImage.GetPointer() );
  marcher->SetStoppingValue( 100.0 );

  // turn on debugging
  marcher->DebugOn();


  // update the marcher
  marcher->Update();


  // check the results
  FloatImage::Pointer output = marcher->GetOutput();
  itk::ImageRegionIterator<FloatImage>
    iterator( output, output->GetBufferedRegion() );

  bool passed = true;
  for(; !iterator.IsAtEnd(); ++iterator )
    {
    FloatImage::IndexType tempIndex = iterator.GetIndex();
    auto outputValue = (float) iterator.Get();

    if( ( ( tempIndex[0] > 22 ) && ( tempIndex [0] < 42 ) && ( tempIndex[1] > 27 ) && ( tempIndex[1] < 37 ) ) ||
        ( ( tempIndex[1] > 22 ) && ( tempIndex [1] < 42 ) && ( tempIndex[0] > 27 ) && ( tempIndex[0] < 37 ) ) )
      {
      tempIndex -= offset0;
      double distance = 0.0;
      for ( int j = 0; j < 2; j++ )
        {
          distance += tempIndex[j] * tempIndex[j];
        }
      distance = std::sqrt( distance );

      if (distance < itk::NumericTraits<double>::epsilon() )
        {
        continue;
        }

      if ( itk::Math::abs( outputValue ) / distance > 1.42 )
        {
        std::cout << iterator.GetIndex() << " ";
        std::cout << itk::Math::abs( outputValue ) / distance << " ";
        std::cout << itk::Math::abs( outputValue ) << " " << distance << std::endl;
        passed = false;
        }
      }
    else
      {
      if( outputValue != 0. )
        {
        std::cout << iterator.GetIndex() << " ";
        std::cout << outputValue << " " << 0.;
        std::cout << std::endl;
        passed = false;
        }
      }
    }

  // Exercise other member functions
  std::cout << "SpeedConstant: " << marcher->GetSpeedConstant() << std::endl;
  std::cout << "StoppingValue: " << marcher->GetStoppingValue() << std::endl;
  std::cout << "CollectPoints: " << marcher->GetCollectPoints() << std::endl;

  marcher->SetNormalizationFactor( 2.0 );
  std::cout << "NormalizationFactor: " << marcher->GetNormalizationFactor();
  std::cout << std::endl;

  std::cout << "SpeedImage: " << marcher->GetInput();
  std::cout << std::endl;

  marcher->Print( std::cout );

  if ( passed )
    {
    std::cout << "Fast Marching test passed" << std::endl;
    return EXIT_SUCCESS;
    }
  else
    {
    std::cout << "Fast Marching test failed" << std::endl;
    return EXIT_FAILURE;
    }

}