1package require psfgen
2topology top_all27_na.rtf
3pdbalias residue A ADE
4pdbalias residue T THY
5pdbalias residue G GUA
6pdbalias residue C CYT
7pdbalias atom ADE O3* O3'
8pdbalias atom THY O3* O3'
9pdbalias atom GUA O3* O3'
10pdbalias atom CYT O3* O3'
11pdbalias atom ADE O4* O4'
12pdbalias atom THY O4* O4'
13pdbalias atom GUA O4* O4'
14pdbalias atom CYT O4* O4'
15pdbalias atom ADE O5* O5'
16pdbalias atom THY O5* O5'
17pdbalias atom GUA O5* O5'
18pdbalias atom CYT O5* O5'
19pdbalias atom ADE C1* C1'
20pdbalias atom THY C1* C1'
21pdbalias atom GUA C1* C1'
22pdbalias atom CYT C1* C1'
23pdbalias atom ADE C2* C2'
24pdbalias atom THY C2* C2'
25pdbalias atom GUA C2* C2'
26pdbalias atom CYT C2* C2'
27pdbalias atom ADE C3* C3'
28pdbalias atom THY C3* C3'
29pdbalias atom GUA C3* C3'
30pdbalias atom CYT C3* C3'
31pdbalias atom ADE C4* C4'
32pdbalias atom THY C4* C4'
33pdbalias atom GUA C4* C4'
34pdbalias atom CYT C4* C4'
35pdbalias atom ADE C5* C5'
36pdbalias atom THY C5* C5'
37pdbalias atom GUA C5* C5'
38pdbalias atom CYT C5* C5'
39pdbalias atom ADE H1* H1'
40pdbalias atom THY H1* H1'
41pdbalias atom GUA H1* H1'
42pdbalias atom CYT H1* H1'
43pdbalias atom ADE H3* H3'
44pdbalias atom THY H3* H3'
45pdbalias atom GUA H3* H3'
46pdbalias atom CYT H3* H3'
47pdbalias atom ADE H4* H4'
48pdbalias atom THY H4* H4'
49pdbalias atom GUA H4* H4'
50pdbalias atom CYT H4* H4'
51pdbalias atom ADE 1H5* H5'
52pdbalias atom THY 1H5* H5'
53pdbalias atom GUA 1H5* H5'
54pdbalias atom CYT 1H5* H5'
55pdbalias atom ADE 2H5* H5''
56pdbalias atom THY 2H5* H5''
57pdbalias atom GUA 2H5* H5''
58pdbalias atom CYT 2H5* H5''
59pdbalias atom ADE 1H2* H2'
60pdbalias atom THY 1H2* H2'
61pdbalias atom GUA 1H2* H2'
62pdbalias atom CYT 1H2* H2'
63pdbalias atom ADE 2H2* H2''
64pdbalias atom THY 2H2* H2''
65pdbalias atom GUA 2H2* H2''
66pdbalias atom CYT 2H2* H2''
67pdbalias atom GUA 1H2 H21
68pdbalias atom GUA 2H2 H22
69pdbalias atom CYT 1H4 H41
70pdbalias atom CYT 2H4 H42
71pdbalias atom ADE 1H6 H61
72pdbalias atom ADE 2H6 H62
73pdbalias atom THY 1H5M H51
74pdbalias atom THY 2H5M H52
75pdbalias atom THY 3H5M H53
76segment A {pdb 1ac7_pared.pdb}
77coordpdb 1ac7_pared.pdb A
78guesscoord
79writepdb 1ac7.pdb
80writepsf charmm 1ac7.psf
81exit
82