Lines Matching refs:score_
62 score_.resize(rows + 1); in Matrix()
65 std::fill(score_.begin(), score_.end(), z); in Matrix()
69 return ColumnIterator(hgap_.begin(), score_.begin()); in begin()
77 score_[i] = set_channel(score_[i], c, z); in set_zero()
79 score_[l] = set_channel(score_[l], c, z); in set_zero()
85 return score_[i + 1];
89 MemBuffer<_sv> hgap_, score_;
91 static thread_local MemBuffer<_sv> hgap_, score_;
97 template<typename _sv> thread_local MemBuffer<_sv> Matrix<_sv>::score_;
214 score_.resize(rows + 1); in TracebackVectorMatrix()
217 std::fill(score_.begin(), score_.end(), _sv()); in TracebackVectorMatrix()
222 return ColumnIterator(hgap_.begin(), score_.begin(), &trace_mask_[col*rows_]); in begin()
230 score_[i] = set_channel(score_[i], c, ::DISPATCH_ARCH::ScoreTraits<_sv>::zero_score()); in set_zero()
232 score_[l] = set_channel(score_[l], c, ::DISPATCH_ARCH::ScoreTraits<_sv>::zero_score()); in set_zero()
244 MemBuffer<_sv> hgap_, score_; member
246 static thread_local MemBuffer<_sv> hgap_, score_; member
255 template<typename _sv> thread_local MemBuffer<_sv> TracebackVectorMatrix<_sv>::score_;