Lines Matching refs:mothurRemove

400 …trol_pressed()) {	for (int i = 0; i < outputNames.size(); i++) {	util.mothurRemove(outputNames[i])…  in execute()
418 …trol_pressed()) {	for (int i = 0; i < outputNames.size(); i++) {	util.mothurRemove(outputNames[i])…  in execute()
652 …   if (decompressionHelped) { util.mothurRemove(fileInputs[0]); util.mothurRemove(fileInputs[1]); }  in processSingleFileOption()
654 …trol_pressed()) { for (int i = 0; i < outputNames.size(); i++) {	util.mothurRemove(outputNames[i])…  in processSingleFileOption()
662                 if (outQualFile != "")      { util.mothurRemove(outQualFile);       }  in processSingleFileOption()
663                 if (outScrapQualFile != "") { util.mothurRemove(outScrapQualFile);  }  in processSingleFileOption()
1010 …      util.appendFiles(outMisMatchFile, compositeMisMatchFile); util.mothurRemove(outMisMatchFile);  in processMultipleFileOption()
1011 …              util.appendFiles(outFastaFile, compositeFastaFile);  util.mothurRemove(outFastaFile);  in processMultipleFileOption()
1012 …util.appendFiles(outScrapFastaFile, compositeScrapFastaFile); util.mothurRemove(outScrapFastaFile);  in processMultipleFileOption()
1017                 util.mothurRemove(outQualFile); util.mothurRemove(outScrapQualFile);  in processMultipleFileOption()
1021 …if (!makeQualFile) { util.mothurRemove(compositeQualFile); util.mothurRemove(compositeScrapQualFil…  in processMultipleFileOption()
2124 …gparams->bundle->util.mothurRemove(theseFileInputs[0]); gparams->bundle->util.mothurRemove(theseFi…  in driverContigsGroups()
2125 …          if (theseQIInputs[0] != "NONE") { gparams->bundle->util.mothurRemove(theseQIInputs[0]); }  in driverContigsGroups()
2126 …          if (theseQIInputs[1] != "NONE") { gparams->bundle->util.mothurRemove(theseQIInputs[1]); }  in driverContigsGroups()