Lines Matching refs:Reset

47      arg.Reset(new CProgramDescriptionArgs(kProgram, "Domain enhanced lookup "  in CDeltaBlastAppArgs()
61 m_BlastDbArgs.Reset(new CBlastDatabaseArgs); in CDeltaBlastAppArgs()
62 arg.Reset(m_BlastDbArgs); in CDeltaBlastAppArgs()
65 m_StdCmdLineArgs.Reset(new CStdCmdLineArgs); in CDeltaBlastAppArgs()
66 arg.Reset(m_StdCmdLineArgs); in CDeltaBlastAppArgs()
69 arg.Reset(new CGenericSearchArgs(kQueryIsProtein)); in CDeltaBlastAppArgs()
72 arg.Reset(new CFilteringArgs(kQueryIsProtein, kFilterByDefault)); in CDeltaBlastAppArgs()
75 arg.Reset(new CMatrixNameArg); in CDeltaBlastAppArgs()
78 arg.Reset(new CWordThresholdArg); in CDeltaBlastAppArgs()
81 m_HspFilteringArgs.Reset(new CHspFilteringArgs); in CDeltaBlastAppArgs()
82 arg.Reset(m_HspFilteringArgs); in CDeltaBlastAppArgs()
85 arg.Reset(new CWindowSizeArg); in CDeltaBlastAppArgs()
88 m_QueryOptsArgs.Reset(new CQueryOptionsArgs(kQueryIsProtein)); in CDeltaBlastAppArgs()
89 arg.Reset(m_QueryOptsArgs); in CDeltaBlastAppArgs()
92 m_FormattingArgs.Reset(new CFormattingArgs); in CDeltaBlastAppArgs()
93 arg.Reset(m_FormattingArgs); in CDeltaBlastAppArgs()
96 m_MTArgs.Reset(new CMTArgs); in CDeltaBlastAppArgs()
97 arg.Reset(m_MTArgs); in CDeltaBlastAppArgs()
100 m_RemoteArgs.Reset(new CRemoteArgs); in CDeltaBlastAppArgs()
101 arg.Reset(m_RemoteArgs); in CDeltaBlastAppArgs()
104 arg.Reset(new CCompositionBasedStatsArgs(kIsCBS2and3Supported, in CDeltaBlastAppArgs()
108 arg.Reset(new CGapTriggerArgs(kQueryIsProtein)); in CDeltaBlastAppArgs()
111 m_PsiBlastArgs.Reset(new CPsiBlastArgs(CPsiBlastArgs::eProteinDb, in CDeltaBlastAppArgs()
113 arg.Reset(m_PsiBlastArgs); in CDeltaBlastAppArgs()
116 arg.Reset(new CPssmEngineArgs(kIsDeltaBlast)); in CDeltaBlastAppArgs()
119 m_DeltaBlastArgs.Reset(new CDeltaBlastArgs()); in CDeltaBlastAppArgs()
120 arg.Reset(m_DeltaBlastArgs); in CDeltaBlastAppArgs()
123 m_DebugArgs.Reset(new CDebugArgs); in CDeltaBlastAppArgs()
124 arg.Reset(m_DebugArgs); in CDeltaBlastAppArgs()