Lines Matching refs:current_col
1895 if (current_col != NULL && *current_col){\
1896 Saved_ch = *(current_col +1);\
1897 *(current_col +1) = '\0';\
1903 *(current_col +1) = Saved_ch;
1910 CharPtr current_col=0, points_at_term_null,spare, line_use = NULL; in Nlm_gbparselex() local
1932 current_col = line_use ; in Nlm_gbparselex()
1945 while (current_col < points_at_term_null && ! die_now) { in Nlm_gbparselex()
1952 switch ( *current_col){ in Nlm_gbparselex()
1957 for (spare = current_col +1; spare < points_at_term_null; in Nlm_gbparselex()
1967 len = spare-current_col + 1; in Nlm_gbparselex()
1971 current_col,len); in Nlm_gbparselex()
1972 current_col += len; in Nlm_gbparselex()
1982 for (dex=0, spare = current_col; isdigit((int) *spare); spare ++){ in Nlm_gbparselex()
1986 StringNCpy(current_token -> data.ptrvalue, current_col, dex); in Nlm_gbparselex()
1987 current_col += dex -1; in Nlm_gbparselex()
1995 if (StringNCmp(current_col,"join",(unsigned) 4)!=0){ in Nlm_gbparselex()
1998 for(;*current_col && *current_col != '('; current_col++) in Nlm_gbparselex()
2000 current_col -- ; /* back up 'cause ++ follows */ in Nlm_gbparselex()
2002 current_col += 3; in Nlm_gbparselex()
2011 if (StringNCmp(current_col,"order",(unsigned) 5)!=0){ in Nlm_gbparselex()
2012 if (StringNCmp(current_col,"one-of",(unsigned) 6)!=0){ in Nlm_gbparselex()
2015 for(;*current_col && *current_col != '('; current_col++) in Nlm_gbparselex()
2017 current_col -- ; /* back up 'cause ++ follows */ in Nlm_gbparselex()
2020 current_col += 5; in Nlm_gbparselex()
2024 current_col += 4; in Nlm_gbparselex()
2034 if (StringNCmp(current_col,"replace",(unsigned) 6)!=0){ in Nlm_gbparselex()
2037 for(;*current_col && *current_col != '('; current_col++) in Nlm_gbparselex()
2039 current_col -- ; /* back up 'cause ++ follows */ in Nlm_gbparselex()
2041 current_col += 6; in Nlm_gbparselex()
2050 if(StringNCmp(current_col, "gap", 3) == 0 && in Nlm_gbparselex()
2051 (current_col[3] == '(' || in Nlm_gbparselex()
2052 current_col[3] == ' ' || in Nlm_gbparselex()
2053 current_col[3] == '\t' || in Nlm_gbparselex()
2054 current_col[3] == '\0')) in Nlm_gbparselex()
2059 if(StringNICmp(current_col + 3, "(unk", 4) == 0) in Nlm_gbparselex()
2065 current_col += 4; in Nlm_gbparselex()
2067 current_col += 2; in Nlm_gbparselex()
2070 if(StringNCmp(current_col, "gi|", 3) == 0) { in Nlm_gbparselex()
2072 current_col += 3; in Nlm_gbparselex()
2073 for (; IS_DIGIT(*current_col); current_col++) ; in Nlm_gbparselex()
2077 if (StringNCmp(current_col,"group",(unsigned) 5)!=0){ in Nlm_gbparselex()
2080 for(;*current_col && *current_col != '('; current_col++) in Nlm_gbparselex()
2082 current_col -- ; /* back up 'cause ++ follows */ in Nlm_gbparselex()
2084 current_col += 4; in Nlm_gbparselex()
2094 if (StringNCmp(current_col,"complement",(unsigned) 10)!=0){ in Nlm_gbparselex()
2097 for(;*current_col && *current_col != '('; current_col++) in Nlm_gbparselex()
2099 current_col -- ; /* back up 'cause ++ follows */ in Nlm_gbparselex()
2101 current_col += 9; in Nlm_gbparselex()
2109 if (StringNCmp(current_col,"bases",(unsigned) 5)!=0){ in Nlm_gbparselex()
2113 current_col += 4; in Nlm_gbparselex()
2121 if (StringNCmp(current_col,"(base",(unsigned) 5)==0){ in Nlm_gbparselex()
2124 current_col += 4; in Nlm_gbparselex()
2125 if (*current_col != '\0') in Nlm_gbparselex()
2126 if ( * (current_col +1) == 's') in Nlm_gbparselex()
2127 current_col ++; in Nlm_gbparselex()
2131 }else if (StringNCmp(current_col,"(sites",(unsigned) 5)==0){ in Nlm_gbparselex()
2133 current_col += 5; in Nlm_gbparselex()
2134 if (*current_col != '\0') in Nlm_gbparselex()
2135 if ( * (current_col +1) == ')'){ in Nlm_gbparselex()
2136 current_col ++; in Nlm_gbparselex()
2146 if (*current_col != '\0'){ in Nlm_gbparselex()
2147 if ( * (current_col +1) == ';'){ in Nlm_gbparselex()
2148 current_col ++; in Nlm_gbparselex()
2149 }else if (StringNCmp(current_col +1," ;", (unsigned) 2) ==0){ in Nlm_gbparselex()
2150 current_col += 2; in Nlm_gbparselex()
2177 if (StringNCmp(current_col,"..",(unsigned) 2)!=0){ in Nlm_gbparselex()
2181 current_col ++ ; in Nlm_gbparselex()
2207 if (StringNCmp(current_col,"to",(unsigned) 2)!=0){ in Nlm_gbparselex()
2212 current_col ++ ; in Nlm_gbparselex()
2217 if (StringNCmp(current_col,"site",(unsigned) 4)!=0){ in Nlm_gbparselex()
2222 current_col += 3 ; in Nlm_gbparselex()
2223 if (*current_col != '\0') in Nlm_gbparselex()
2224 if ( * (current_col +1) == 's') in Nlm_gbparselex()
2225 current_col ++; in Nlm_gbparselex()
2226 if (*current_col != '\0'){ in Nlm_gbparselex()
2227 if ( * (current_col +1) == ';'){ in Nlm_gbparselex()
2228 current_col ++; in Nlm_gbparselex()
2229 }else if (StringNCmp(current_col +1," ;", (unsigned) 2) ==0){ in Nlm_gbparselex()
2230 current_col += 2; in Nlm_gbparselex()
2247 dex = Nlm_gbparse_accprefix(current_col); in Nlm_gbparselex()
2248 spare = current_col + dex; in Nlm_gbparselex()
2261 current_col --; in Nlm_gbparselex()
2264 StringNCpy(current_token -> data.ptrvalue, current_col, dex); in Nlm_gbparselex()
2265 current_col += dex ; in Nlm_gbparselex()
2270 current_col ++; in Nlm_gbparselex()
2299 CharPtr current_col=0, points_at_term_null,spare, line_use = NULL; in Nlm_gbparselex_ver() local
2318 current_col = line_use ; in Nlm_gbparselex_ver()
2331 while (current_col < points_at_term_null && ! die_now) { in Nlm_gbparselex_ver()
2338 switch ( *current_col){ in Nlm_gbparselex_ver()
2343 for (spare = current_col +1; spare < points_at_term_null; in Nlm_gbparselex_ver()
2353 len = spare-current_col + 1; in Nlm_gbparselex_ver()
2357 current_col,len); in Nlm_gbparselex_ver()
2358 current_col += len; in Nlm_gbparselex_ver()
2368 for (dex=0, spare = current_col; isdigit((int) *spare); spare ++){ in Nlm_gbparselex_ver()
2372 StringNCpy(current_token -> data.ptrvalue, current_col, dex); in Nlm_gbparselex_ver()
2373 current_col += dex -1; in Nlm_gbparselex_ver()
2381 if (StringNCmp(current_col,"join",(unsigned) 4)!=0){ in Nlm_gbparselex_ver()
2384 for(;*current_col && *current_col != '('; current_col++) in Nlm_gbparselex_ver()
2386 current_col -- ; /* back up 'cause ++ follows */ in Nlm_gbparselex_ver()
2388 current_col += 3; in Nlm_gbparselex_ver()
2397 if (StringNCmp(current_col,"order",(unsigned) 5)!=0){ in Nlm_gbparselex_ver()
2398 if (StringNCmp(current_col,"one-of",(unsigned) 6)!=0){ in Nlm_gbparselex_ver()
2401 for(;*current_col && *current_col != '('; current_col++) in Nlm_gbparselex_ver()
2403 current_col -- ; /* back up 'cause ++ follows */ in Nlm_gbparselex_ver()
2406 current_col += 5; in Nlm_gbparselex_ver()
2410 current_col += 4; in Nlm_gbparselex_ver()
2420 if (StringNCmp(current_col,"replace",(unsigned) 6)!=0){ in Nlm_gbparselex_ver()
2423 for(;*current_col && *current_col != '('; current_col++) in Nlm_gbparselex_ver()
2425 current_col -- ; /* back up 'cause ++ follows */ in Nlm_gbparselex_ver()
2427 current_col += 6; in Nlm_gbparselex_ver()
2436 if(StringNCmp(current_col, "gap", 3) == 0 && in Nlm_gbparselex_ver()
2437 (current_col[3] == '(' || in Nlm_gbparselex_ver()
2438 current_col[3] == ' ' || in Nlm_gbparselex_ver()
2439 current_col[3] == '\t' || in Nlm_gbparselex_ver()
2440 current_col[3] == '\0')) in Nlm_gbparselex_ver()
2445 if(StringNICmp(current_col + 3, "(unk", 4) == 0) in Nlm_gbparselex_ver()
2451 current_col += 4; in Nlm_gbparselex_ver()
2453 current_col += 2; in Nlm_gbparselex_ver()
2456 if(StringNCmp(current_col, "gi|", 3) == 0) { in Nlm_gbparselex_ver()
2458 current_col += 3; in Nlm_gbparselex_ver()
2459 for (; IS_DIGIT(*current_col); current_col++) ; in Nlm_gbparselex_ver()
2463 if (StringNCmp(current_col,"group",(unsigned) 5)!=0){ in Nlm_gbparselex_ver()
2466 for(;*current_col && *current_col != '('; current_col++) in Nlm_gbparselex_ver()
2468 current_col -- ; /* back up 'cause ++ follows */ in Nlm_gbparselex_ver()
2470 current_col += 4; in Nlm_gbparselex_ver()
2480 if (StringNCmp(current_col,"complement",(unsigned) 10)!=0){ in Nlm_gbparselex_ver()
2483 for(;*current_col && *current_col != '('; current_col++) in Nlm_gbparselex_ver()
2485 current_col -- ; /* back up 'cause ++ follows */ in Nlm_gbparselex_ver()
2487 current_col += 9; in Nlm_gbparselex_ver()
2495 if (StringNCmp(current_col,"bases",(unsigned) 5)!=0){ in Nlm_gbparselex_ver()
2499 current_col += 4; in Nlm_gbparselex_ver()
2507 if (StringNCmp(current_col,"(base",(unsigned) 5)==0){ in Nlm_gbparselex_ver()
2510 current_col += 4; in Nlm_gbparselex_ver()
2511 if (*current_col != '\0') in Nlm_gbparselex_ver()
2512 if ( * (current_col +1) == 's') in Nlm_gbparselex_ver()
2513 current_col ++; in Nlm_gbparselex_ver()
2517 }else if (StringNCmp(current_col,"(sites",(unsigned) 5)==0){ in Nlm_gbparselex_ver()
2519 current_col += 5; in Nlm_gbparselex_ver()
2520 if (*current_col != '\0') in Nlm_gbparselex_ver()
2521 if ( * (current_col +1) == ')'){ in Nlm_gbparselex_ver()
2522 current_col ++; in Nlm_gbparselex_ver()
2532 if (*current_col != '\0'){ in Nlm_gbparselex_ver()
2533 if ( * (current_col +1) == ';'){ in Nlm_gbparselex_ver()
2534 current_col ++; in Nlm_gbparselex_ver()
2535 }else if (StringNCmp(current_col +1," ;", (unsigned) 2) ==0){ in Nlm_gbparselex_ver()
2536 current_col += 2; in Nlm_gbparselex_ver()
2563 if (StringNCmp(current_col,"..",(unsigned) 2)!=0){ in Nlm_gbparselex_ver()
2567 current_col ++ ; in Nlm_gbparselex_ver()
2593 if (StringNCmp(current_col,"to",(unsigned) 2)!=0){ in Nlm_gbparselex_ver()
2598 current_col ++ ; in Nlm_gbparselex_ver()
2603 if (StringNCmp(current_col,"site",(unsigned) 4)!=0){ in Nlm_gbparselex_ver()
2608 current_col += 3 ; in Nlm_gbparselex_ver()
2609 if (*current_col != '\0') in Nlm_gbparselex_ver()
2610 if ( * (current_col +1) == 's') in Nlm_gbparselex_ver()
2611 current_col ++; in Nlm_gbparselex_ver()
2612 if (*current_col != '\0'){ in Nlm_gbparselex_ver()
2613 if ( * (current_col +1) == ';'){ in Nlm_gbparselex_ver()
2614 current_col ++; in Nlm_gbparselex_ver()
2615 }else if (StringNCmp(current_col +1," ;", (unsigned) 2) ==0){ in Nlm_gbparselex_ver()
2616 current_col += 2; in Nlm_gbparselex_ver()
2633 dex = Nlm_gbparse_accprefix(current_col); in Nlm_gbparselex_ver()
2634 spare = current_col + dex; in Nlm_gbparselex_ver()
2647 current_col --; in Nlm_gbparselex_ver()
2650 StringNCpy(current_token -> data.ptrvalue, current_col, dex); in Nlm_gbparselex_ver()
2651 current_col += dex ; in Nlm_gbparselex_ver()
2656 current_col ++; in Nlm_gbparselex_ver()