Lines Matching refs:parent_class_number
830 len *= tree->mixt_tree->mod->ras->gamma_rr->v[tree->mod->ras->parent_class_number]; in MIXT_Lk()
929 sum_scale_left_cat[tree->mod->ras->parent_class_number] = in MIXT_Lk()
934 sum_scale_rght_cat[tree->mod->ras->parent_class_number] = in MIXT_Lk()
940 sum_scale_left_cat[tree->mod->ras->parent_class_number] + in MIXT_Lk()
941 sum_scale_rght_cat[tree->mod->ras->parent_class_number]; in MIXT_Lk()
980 mixt_tree->mod->ras->gamma_r_proba->v[tree->mod->ras->parent_class_number] * in MIXT_Lk()
2110 mixt_tree->mod->ras->gamma_r_proba->v[tree->mod->ras->parent_class_number] * in MIXT_Get_Sum_Of_Probas_Across_Mixtures()
2752 … curr_mixt_tree->mod->ras->gamma_r_proba->v[tree->mod->ras->parent_class_number] * in MIXT_Ancestral_Sequences_One_Node()
2759 tree->mod->ras->parent_class_number, in MIXT_Ancestral_Sequences_One_Node()
2760 … curr_mixt_tree->mod->ras->gamma_r_proba->v[tree->mod->ras->parent_class_number]); in MIXT_Ancestral_Sequences_One_Node()
2893 rr *= mixt_tree->mod->ras->gamma_rr->v[tree->mod->ras->parent_class_number]; in MIXT_dLk()
2987 sum_scale_left_cat[tree->mod->ras->parent_class_number] = in MIXT_dLk()
2992 sum_scale_rght_cat[tree->mod->ras->parent_class_number] = in MIXT_dLk()
2998 sum_scale_left_cat[tree->mod->ras->parent_class_number] + in MIXT_dLk()
2999 sum_scale_rght_cat[tree->mod->ras->parent_class_number]; in MIXT_dLk()
3041 mixt_tree->mod->ras->gamma_r_proba->v[tree->mod->ras->parent_class_number] * in MIXT_dLk()
3050 mixt_tree->mod->ras->gamma_r_proba->v[tree->mod->ras->parent_class_number] * in MIXT_dLk()
3419 loc_mixt_tree->mod->ras->gamma_r_proba->v[tree->mod->ras->parent_class_number] * in MIXT_Sample_Ancestral_Seq()
3761 mixt_tree->mod->ras->gamma_rr->v[tree->mod->ras->parent_class_number] * in MIXT_Print_Site_Lk()
3763 mixt_tree->mod->ras->gamma_r_proba->v[tree->mod->ras->parent_class_number]; in MIXT_Print_Site_Lk()
3767 mixt_tree->mod->ras->gamma_r_proba->v[tree->mod->ras->parent_class_number]; in MIXT_Print_Site_Lk()