Lines Matching refs:delimiter
91 delimiter = dialect.delimiter
93 ids = _parse_header(header, delimiter)
94 first_id, _ = next(_parse_data(fh, delimiter), (None, None))
97 return True, {'delimiter': delimiter}
105 def _lsmat_to_dissimilarity_matrix(fh, delimiter='\t'): argument
106 return _lsmat_to_matrix(DissimilarityMatrix, fh, delimiter)
110 def _lsmat_to_distance_matrix(fh, delimiter='\t'): argument
111 return _lsmat_to_matrix(DistanceMatrix, fh, delimiter)
115 def _dissimilarity_matrix_to_lsmat(obj, fh, delimiter='\t'): argument
116 _matrix_to_lsmat(obj, fh, delimiter)
120 def _distance_matrix_to_lsmat(obj, fh, delimiter='\t'): argument
121 _matrix_to_lsmat(obj, fh, delimiter)
124 def _lsmat_to_matrix(cls, fh, delimiter): argument
143 ids = _parse_header(header, delimiter)
148 for row_idx, (row_id, row_data) in enumerate(_parse_data(fh, delimiter)):
196 def _parse_header(header, delimiter): argument
197 tokens = header.rstrip().split(delimiter)
201 "Header must start with delimiter %r." % str(delimiter))
206 def _parse_data(fh, delimiter): argument
213 tokens = line.rstrip().split(delimiter)
219 def _matrix_to_lsmat(obj, fh, delimiter): argument
220 delimiter = "%s" % delimiter
222 fh.write(_format_ids(ids, delimiter))
227 fh.write(delimiter)
228 fh.write(delimiter.join(np.asarray(vals, dtype=np.str)))
232 def _format_ids(ids, delimiter): argument
233 return delimiter.join([''] + list(ids))