911 	clockmode = 0; /* nonclocklike branch lengths */  in quartet_lklhd()
940 	clockmode = 0; /* nonclocklike branch lengths */  in quartet_alklhd()
977 	clockmode = 0; /* nonclocklike branch lengths */  in usertree_lklhd()
1012 	clockmode = 0; /* nonclocklike branch lengths */  in usertree_alklhd()
1137 	if ((int)((clockmode ? up->lengthc : up->length) * Proportion) >= MAXOVER) {  in prbranch()
1141 		column[depth] = (int)((clockmode ? up->lengthc : up->length) * Proportion) + 3;  in prbranch()
1283 			fprintf(fp, ":%.5f", ((clockmode ? cp->lengthc : cp->length))*0.01);  in fputphylogeny()
1306 				fprintf(fp, ":%.5f", ((clockmode ? cp->lengthc : cp->length))*0.01);  in fputphylogeny()
1331 	if (clockmode) {  in resulttree()
1344 		blen = (clockmode ? ep->lengthc : ep->length);  in resulttree()
1347 		if (clockmode)  in resulttree()
1354 			blen = (clockmode ? ip->lengthc : ip->length);  in resulttree()
1357 			if (clockmode)  in resulttree()
1366 				if (clockmode) {  in resulttree()
1386 				fprintf(outfp, "     log L: %.2f\n", (clockmode ? Ctree->lklhdc : Ctree->lklhd));  in resulttree()
1868 	clockmode = 1; /* clocklike branch lengths */