Lines Matching refs:RND_SEQ
39 #define RND_SEQ 1 macro
576 …temp = SyWise20_SHATTER_SPECIAL(mat,0,j - 1,RND_SEQ) + ((mat->nonc_cost+mat->nonc->base[CSEQ_PAIR_… in calculate_shatter_SyWise20()
590 score = SyWise20_SHATTER_SPECIAL(mat,0,j,RND_SEQ); in calculate_shatter_SyWise20()
600 temp = SyWise20_SHATTER_SPECIAL(mat,0,j - 1,RND_SEQ) + (0) + (0); in calculate_shatter_SyWise20()
612 SyWise20_SHATTER_SPECIAL(mat,0,j,RND_SEQ) = score; in calculate_shatter_SyWise20()
627 temp = SyWise20_SHATTER_SPECIAL(mat,0,j - 1,RND_SEQ) + (0) + (0); in calculate_shatter_SyWise20()
876 SyWise20_VSMALL_SPECIAL(mat,i,j,RND_SEQ) = NEGI; in score_only_SyWise20()
1254 …temp = SyWise20_VSMALL_SPECIAL(mat,0,j - 1,RND_SEQ) + ((mat->nonc_cost+mat->nonc->base[CSEQ_PAIR_P… in score_only_SyWise20()
1268 score = SyWise20_VSMALL_SPECIAL(mat,0,j,RND_SEQ); in score_only_SyWise20()
1278 temp = SyWise20_VSMALL_SPECIAL(mat,0,j - 1,RND_SEQ) + (0) + (0); in score_only_SyWise20()
1290 SyWise20_VSMALL_SPECIAL(mat,0,j,RND_SEQ) = score; in score_only_SyWise20()
1305 temp = SyWise20_VSMALL_SPECIAL(mat,0,j - 1,RND_SEQ) + (0) + (0); in score_only_SyWise20()
1575 SyWise20_EXPL_SPECIAL(mat,i,j,RND_SEQ) = NEGI; in init_SyWise20()
1834 if( offj == 1 && prev->state == (RND_SEQ+14) ) { in recalculate_PackAln_SyWise20()
1840 case (RND_SEQ+14) : in recalculate_PackAln_SyWise20()
1845 if( offj == 1 && prev->state == (RND_SEQ+14) ) { in recalculate_PackAln_SyWise20()
1859 if( offj == 1 && prev->state == (RND_SEQ+14) ) { in recalculate_PackAln_SyWise20()
2893 if( temp == SyWise20_DC_SHADOW_SPECIAL(mat,i - 0,j - 1,RND_SEQ) ) { in max_special_strip_SyWise20()
2896 *retstate = RND_SEQ; in max_special_strip_SyWise20()
2899 *cellscore = cscore - SyWise20_DC_SHADOW_SPECIAL(mat,i-0,j-1,RND_SEQ); in max_special_strip_SyWise20()
2901 return SyWise20_DC_SHADOW_MATRIX(mat,i - 0,j - 1,RND_SEQ) ; in max_special_strip_SyWise20()
2917 case RND_SEQ : in max_special_strip_SyWise20()
2932 if( temp == SyWise20_DC_SHADOW_SPECIAL(mat,i - 0,j - 1,RND_SEQ) ) { in max_special_strip_SyWise20()
2935 *retstate = RND_SEQ; in max_special_strip_SyWise20()
2938 *cellscore = cscore - SyWise20_DC_SHADOW_SPECIAL(mat,i-0,j-1,RND_SEQ); in max_special_strip_SyWise20()
2940 return SyWise20_DC_SHADOW_MATRIX(mat,i - 0,j - 1,RND_SEQ) ; in max_special_strip_SyWise20()
2958 if( temp == SyWise20_DC_SHADOW_SPECIAL(mat,i - 0,j - 1,RND_SEQ) ) { in max_special_strip_SyWise20()
2961 *retstate = RND_SEQ; in max_special_strip_SyWise20()
2964 *cellscore = cscore - SyWise20_DC_SHADOW_SPECIAL(mat,i-0,j-1,RND_SEQ); in max_special_strip_SyWise20()
2966 return SyWise20_DC_SHADOW_MATRIX(mat,i - 0,j - 1,RND_SEQ) ; in max_special_strip_SyWise20()
6014 …temp = SyWise20_DC_OPT_SHADOW_SPECIAL(mat,0,j - 1,RND_SEQ) + ((mat->nonc_cost+mat->nonc->base[CSEQ… in dc_optimised_start_end_calc_SyWise20()
6019 …AL_SP(mat,i,j,NON_CDS_CONSERVED,k) = SyWise20_DC_OPT_SHADOW_SPECIAL_SP(mat,i - 0,j - 1,RND_SEQ,k); in dc_optimised_start_end_calc_SyWise20()
6032 score = SyWise20_DC_OPT_SHADOW_SPECIAL(mat,0,j,RND_SEQ); in dc_optimised_start_end_calc_SyWise20()
6041 …SyWise20_DC_OPT_SHADOW_SPECIAL_SP(mat,i,j,RND_SEQ,k) = SyWise20_DC_OPT_SHADOW_SPECIAL_SP(mat,i - 0… in dc_optimised_start_end_calc_SyWise20()
6046 temp = SyWise20_DC_OPT_SHADOW_SPECIAL(mat,0,j - 1,RND_SEQ) + (0) + (0); in dc_optimised_start_end_calc_SyWise20()
6051 …yWise20_DC_OPT_SHADOW_SPECIAL_SP(mat,i,j,RND_SEQ,k) = SyWise20_DC_OPT_SHADOW_SPECIAL_SP(mat,i - 0,… in dc_optimised_start_end_calc_SyWise20()
6061 …SyWise20_DC_OPT_SHADOW_SPECIAL_SP(mat,i,j,RND_SEQ,k) = SyWise20_DC_OPT_SHADOW_SPECIAL_SP(mat,i - 0… in dc_optimised_start_end_calc_SyWise20()
6066 SyWise20_DC_OPT_SHADOW_SPECIAL(mat,0,j,RND_SEQ) = score; in dc_optimised_start_end_calc_SyWise20()
6081 temp = SyWise20_DC_OPT_SHADOW_SPECIAL(mat,0,j - 1,RND_SEQ) + (0) + (0); in dc_optimised_start_end_calc_SyWise20()
6086 …SHADOW_SPECIAL_SP(mat,i,j,END,k) = SyWise20_DC_OPT_SHADOW_SPECIAL_SP(mat,i - 0,j - 1,RND_SEQ,k); in dc_optimised_start_end_calc_SyWise20()
6150 SyWise20_DC_SHADOW_SPECIAL(mat,0,j,RND_SEQ) = NEGI; in init_start_end_linear_SyWise20()
6151 SyWise20_DC_SHADOW_SPECIAL_SP(mat,0,j,RND_SEQ,0) = (-1); in init_start_end_linear_SyWise20()
6570 acu->state1 = RND_SEQ + 14; in AlnConvertSet_SyWise20()
6579 acu->state2 = RND_SEQ + 14; in AlnConvertSet_SyWise20()
6586 acu->state1 = RND_SEQ + 14; in AlnConvertSet_SyWise20()
6587 acu->state2 = RND_SEQ + 14; in AlnConvertSet_SyWise20()
6595 acu->state2 = RND_SEQ + 14; in AlnConvertSet_SyWise20()
6602 acu->state1 = RND_SEQ + 14; in AlnConvertSet_SyWise20()
7440 if( temp == (*h.access_special)(mat,i - 0,j - 1,RND_SEQ) ) { in max_calc_special_SyWise20()
7443 *retstate = RND_SEQ; in max_calc_special_SyWise20()
7446 *cellscore = cscore - (*h.access_special)(mat,i-0,j-1,RND_SEQ); in max_calc_special_SyWise20()
7448 return (*h.access_special)(mat,i - 0,j - 1,RND_SEQ) ; in max_calc_special_SyWise20()
7490 case RND_SEQ : in max_calc_special_SyWise20()
7505 if( temp == (*h.access_special)(mat,i - 0,j - 1,RND_SEQ) ) { in max_calc_special_SyWise20()
7508 *retstate = RND_SEQ; in max_calc_special_SyWise20()
7511 *cellscore = cscore - (*h.access_special)(mat,i-0,j-1,RND_SEQ); in max_calc_special_SyWise20()
7513 return (*h.access_special)(mat,i - 0,j - 1,RND_SEQ) ; in max_calc_special_SyWise20()
7531 if( temp == (*h.access_special)(mat,i - 0,j - 1,RND_SEQ) ) { in max_calc_special_SyWise20()
7534 *retstate = RND_SEQ; in max_calc_special_SyWise20()
7537 *cellscore = cscore - (*h.access_special)(mat,i-0,j-1,RND_SEQ); in max_calc_special_SyWise20()
7539 return (*h.access_special)(mat,i - 0,j - 1,RND_SEQ) ; in max_calc_special_SyWise20()
7952 …temp = SyWise20_EXPL_SPECIAL(mat,0,j - 1,RND_SEQ) + ((mat->nonc_cost+mat->nonc->base[CSEQ_PAIR_PAI… in calculate_SyWise20()
7966 score = SyWise20_EXPL_SPECIAL(mat,0,j,RND_SEQ); in calculate_SyWise20()
7976 temp = SyWise20_EXPL_SPECIAL(mat,0,j - 1,RND_SEQ) + (0) + (0); in calculate_SyWise20()
7988 SyWise20_EXPL_SPECIAL(mat,0,j,RND_SEQ) = score; in calculate_SyWise20()
8003 temp = SyWise20_EXPL_SPECIAL(mat,0,j - 1,RND_SEQ) + (0) + (0); in calculate_SyWise20()
8087 SyWise20_EXPL_SPECIAL(mat,i,j,RND_SEQ) = NEGI; in calculate_dpenv_SyWise20()
8501 …temp = SyWise20_EXPL_SPECIAL(mat,0,j - 1,RND_SEQ) + ((mat->nonc_cost+mat->nonc->base[CSEQ_PAIR_PAI… in calculate_dpenv_SyWise20()
8515 score = SyWise20_EXPL_SPECIAL(mat,0,j,RND_SEQ); in calculate_dpenv_SyWise20()
8525 temp = SyWise20_EXPL_SPECIAL(mat,0,j - 1,RND_SEQ) + (0) + (0); in calculate_dpenv_SyWise20()
8537 SyWise20_EXPL_SPECIAL(mat,0,j,RND_SEQ) = score; in calculate_dpenv_SyWise20()
8552 temp = SyWise20_EXPL_SPECIAL(mat,0,j - 1,RND_SEQ) + (0) + (0); in calculate_dpenv_SyWise20()