| /dports/biology/ugene/ugene-40.1/src/libs_3rdparty/samtools/src/samtools/ |
| H A D | bam_pileup.c | 193 const bam_pileup1_t *bam_plp_next(bam_plp_t iter, int *_tid, int *_pos, int *_n_plp) in bam_plp_next()
267 const bam_pileup1_t *bam_plp_auto(bam_plp_t iter, int *_tid, int *_pos, int *_n_plp) in bam_plp_auto()
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| /dports/biology/stringtie/stringtie-2.1.1/samtools-0.1.18/ |
| H A D | bam_pileup.c | 193 const bam_pileup1_t *bam_plp_next(bam_plp_t iter, int *_tid, int *_pos, int *_n_plp) in bam_plp_next()
267 const bam_pileup1_t *bam_plp_auto(bam_plp_t iter, int *_tid, int *_pos, int *_n_plp) in bam_plp_auto()
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| /dports/biology/seqan1/seqan-1.3.1/lib/samtools/ |
| H A D | bam_pileup.c | 193 const bam_pileup1_t *bam_plp_next(bam_plp_t iter, int *_tid, int *_pos, int *_n_plp) in bam_plp_next()
267 const bam_pileup1_t *bam_plp_auto(bam_plp_t iter, int *_tid, int *_pos, int *_n_plp) in bam_plp_auto()
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| /dports/biology/freebayes/freebayes-1.3.5/contrib/htslib/ |
| H A D | sam.c | 4618 const bam_pileup1_t *bam_plp64_next(bam_plp_t iter, int *_tid, hts_pos_t *_pos, int *_n_plp) in bam_plp64_next()
4670 const bam_pileup1_t *bam_plp_next(bam_plp_t iter, int *_tid, int *_pos, int *_n_plp) in bam_plp_next()
4737 const bam_pileup1_t *bam_plp64_auto(bam_plp_t iter, int *_tid, hts_pos_t *_pos, int *_n_plp) in bam_plp64_auto()
4764 const bam_pileup1_t *bam_plp_auto(bam_plp_t iter, int *_tid, int *_pos, int *_n_plp) in bam_plp_auto()
|
| /dports/biology/kallisto/kallisto-0.46.1/ext/htslib/ |
| H A D | sam.c | 2213 const bam_pileup1_t *bam_plp_next(bam_plp_t iter, int *_tid, int *_pos, int *_n_plp) in bam_plp_next()
2306 const bam_pileup1_t *bam_plp_auto(bam_plp_t iter, int *_tid, int *_pos, int *_n_plp) in bam_plp_auto()
|
| /dports/biology/py-pysam/pysam-0.18.0/htslib/ |
| H A D | sam.c | 5618 const bam_pileup1_t *bam_plp64_next(bam_plp_t iter, int *_tid, hts_pos_t *_pos, int *_n_plp) in bam_plp64_next()
5670 const bam_pileup1_t *bam_plp_next(bam_plp_t iter, int *_tid, int *_pos, int *_n_plp) in bam_plp_next()
5742 const bam_pileup1_t *bam_plp64_auto(bam_plp_t iter, int *_tid, hts_pos_t *_pos, int *_n_plp) in bam_plp64_auto()
5769 const bam_pileup1_t *bam_plp_auto(bam_plp_t iter, int *_tid, int *_pos, int *_n_plp) in bam_plp_auto()
|
| /dports/biology/htslib/htslib-1.14/ |
| H A D | sam.c | 5618 const bam_pileup1_t *bam_plp64_next(bam_plp_t iter, int *_tid, hts_pos_t *_pos, int *_n_plp) in bam_plp64_next()
5670 const bam_pileup1_t *bam_plp_next(bam_plp_t iter, int *_tid, int *_pos, int *_n_plp) in bam_plp_next()
5742 const bam_pileup1_t *bam_plp64_auto(bam_plp_t iter, int *_tid, hts_pos_t *_pos, int *_n_plp) in bam_plp64_auto()
5769 const bam_pileup1_t *bam_plp_auto(bam_plp_t iter, int *_tid, int *_pos, int *_n_plp) in bam_plp_auto()
|
| /dports/biology/vt/vt-0.57721/lib/htslib/ |
| H A D | sam.c | 2454 const bam_pileup1_t *bam_plp_next(bam_plp_t iter, int *_tid, int *_pos, int *_n_plp) in bam_plp_next()
2547 const bam_pileup1_t *bam_plp_auto(bam_plp_t iter, int *_tid, int *_pos, int *_n_plp) in bam_plp_auto()
|
| /dports/biology/stacks/stacks-2.4/htslib/ |
| H A D | sam.c | 2447 const bam_pileup1_t *bam_plp_next(bam_plp_t iter, int *_tid, int *_pos, int *_n_plp) in bam_plp_next()
2540 const bam_pileup1_t *bam_plp_auto(bam_plp_t iter, int *_tid, int *_pos, int *_n_plp) in bam_plp_auto()
|
| /dports/biology/bedtools/bedtools2-2.30.0/src/utils/htslib/ |
| H A D | sam.c | 2624 const bam_pileup1_t *bam_plp_next(bam_plp_t iter, int *_tid, int *_pos, int *_n_plp) in bam_plp_next()
2717 const bam_pileup1_t *bam_plp_auto(bam_plp_t iter, int *_tid, int *_pos, int *_n_plp) in bam_plp_auto()
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