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Searched defs:dynprogL (Results 1 – 4 of 4) sorted by relevance

/dports/biology/gmap/gmap-2020-09-12/src/
H A Dgmap.c1153 Dynprog_T dynprogL, Dynprog_T dynprogM, Dynprog_T dynprogR, in update_stage3middle_list()
1257 Dynprog_T dynprogL, Dynprog_T dynprogM, Dynprog_T dynprogR, in update_stage3list()
1443 Dynprog_T dynprogL, Dynprog_T dynprogM, Dynprog_T dynprogR, in stage3_from_usersegment()
1765 Dynprog_T dynprogL, Dynprog_T dynprogM, Dynprog_T dynprogR, in stage3_from_gregions()
2663 Dynprog_T dynprogL, Dynprog_T dynprogM, Dynprog_T dynprogR) { in check_for_local()
3106 Dynprog_T dynprogL, Dynprog_T dynprogM, Dynprog_T dynprogR) { in check_for_chimera()
3623 Dynprog_T dynprogL, Dynprog_T dynprogM, Dynprog_T dynprogR) { in check_middle_piece_local()
4424 Dynprog_T dynprogL, Dynprog_T dynprogM, Dynprog_T dynprogR, in process_request()
4662 Dynprog_T dynprogL, dynprogM, dynprogR; in worker_mpi_process() local
4878 Dynprog_T dynprogL, dynprogM, dynprogR; in single_thread() local
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H A Dstage3.c9218 Dynprog_T dynprogL, Dynprog_T dynprogM, Dynprog_T dynprogR, in traverse_cdna_gap()
9732 bool jump_late_p, Pairpool_T pairpool, Dynprog_T dynprogL, Dynprog_T dynprogR, in traverse_dual_genome_gap()
11431 Pairpool_T pairpool, Dynprog_T dynprogL, Dynprog_T dynprogM, Dynprog_T dynprogR, in build_dual_breaks()
11545 double defect_rate, Pairpool_T pairpool, Dynprog_T dynprogL, in build_path_end3()
11856 Pairpool_T pairpool, Dynprog_T dynprogL, Dynprog_T dynprogR, in build_pairs_dualintrons()
13533 Pairpool_T pairpool, Dynprog_T dynprogL, Dynprog_T dynprogM, Dynprog_T dynprogR, in path_compute_dir()
14031 int maxpeelback, Pairpool_T pairpool, Dynprog_T dynprogL) { in path_compute_end3()
14182 Pairpool_T pairpool, Dynprog_T dynprogL, Dynprog_T dynprogM, Dynprog_T dynprogR, in path_compute_final()
15547 int maxpeelback, Pairpool_T pairpool, Dynprog_T dynprogL, Dynprog_T dynprogR) { in path_trim()
17611 Dynprog_T dynprogL, Dynprog_T dynprogR, int maxpeelback) { in Stage3_merge_chimera()
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H A Ddynprog_cdna.c807 T dynprogL, T dynprogR, char *rsequenceL, char *rsequence_ucL, in Dynprog_cdna_gap()
H A Ddynprog_genome.c3273 T dynprogL, T dynprogR, in Dynprog_genome_gap()