Searched defs:dynprogL (Results 1 – 4 of 4) sorted by relevance
/dports/biology/gmap/gmap-2020-09-12/src/ |
H A D | gmap.c | 1153 Dynprog_T dynprogL, Dynprog_T dynprogM, Dynprog_T dynprogR, in update_stage3middle_list() 1257 Dynprog_T dynprogL, Dynprog_T dynprogM, Dynprog_T dynprogR, in update_stage3list() 1443 Dynprog_T dynprogL, Dynprog_T dynprogM, Dynprog_T dynprogR, in stage3_from_usersegment() 1765 Dynprog_T dynprogL, Dynprog_T dynprogM, Dynprog_T dynprogR, in stage3_from_gregions() 2663 Dynprog_T dynprogL, Dynprog_T dynprogM, Dynprog_T dynprogR) { in check_for_local() 3106 Dynprog_T dynprogL, Dynprog_T dynprogM, Dynprog_T dynprogR) { in check_for_chimera() 3623 Dynprog_T dynprogL, Dynprog_T dynprogM, Dynprog_T dynprogR) { in check_middle_piece_local() 4424 Dynprog_T dynprogL, Dynprog_T dynprogM, Dynprog_T dynprogR, in process_request() 4662 Dynprog_T dynprogL, dynprogM, dynprogR; in worker_mpi_process() local 4878 Dynprog_T dynprogL, dynprogM, dynprogR; in single_thread() local [all …]
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H A D | stage3.c | 9218 Dynprog_T dynprogL, Dynprog_T dynprogM, Dynprog_T dynprogR, in traverse_cdna_gap() 9732 bool jump_late_p, Pairpool_T pairpool, Dynprog_T dynprogL, Dynprog_T dynprogR, in traverse_dual_genome_gap() 11431 Pairpool_T pairpool, Dynprog_T dynprogL, Dynprog_T dynprogM, Dynprog_T dynprogR, in build_dual_breaks() 11545 double defect_rate, Pairpool_T pairpool, Dynprog_T dynprogL, in build_path_end3() 11856 Pairpool_T pairpool, Dynprog_T dynprogL, Dynprog_T dynprogR, in build_pairs_dualintrons() 13533 Pairpool_T pairpool, Dynprog_T dynprogL, Dynprog_T dynprogM, Dynprog_T dynprogR, in path_compute_dir() 14031 int maxpeelback, Pairpool_T pairpool, Dynprog_T dynprogL) { in path_compute_end3() 14182 Pairpool_T pairpool, Dynprog_T dynprogL, Dynprog_T dynprogM, Dynprog_T dynprogR, in path_compute_final() 15547 int maxpeelback, Pairpool_T pairpool, Dynprog_T dynprogL, Dynprog_T dynprogR) { in path_trim() 17611 Dynprog_T dynprogL, Dynprog_T dynprogR, int maxpeelback) { in Stage3_merge_chimera() [all …]
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H A D | dynprog_cdna.c | 807 T dynprogL, T dynprogR, char *rsequenceL, char *rsequence_ucL, in Dynprog_cdna_gap()
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H A D | dynprog_genome.c | 3273 T dynprogL, T dynprogR, in Dynprog_genome_gap()
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