Searched defs:genomealt (Results 1 – 9 of 9) sorted by relevance
/dports/biology/gmap/gmap-2020-09-12/src/ |
H A D | simplepair.h | 25 char genomealt; member
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H A D | pairdef.h | 28 char genomealt; member
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H A D | chimera.c | 814 Stage3_T left_part, Stage3_T right_part, Genome_T genome, Genome_T genomealt, in find_exonexon_fwd() 952 Stage3_T left_part, Stage3_T right_part, Genome_T genome, Genome_T genomealt, in find_exonexon_rev() 1092 Stage3_T left_part, Stage3_T right_part, Genome_T genome, Genome_T genomealt, in Chimera_find_exonexon()
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H A D | knownsplicing.c | 249 Genome_T genome, Genome_T genomealt, Chrpos_T shortsplicedist) { in Knownsplicing_retrieve_via_splicesites()
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H A D | get-genome.c | 231 print_sequence (Genome_T genome, Genome_T genomealt, Univcoord_T genomicstart, Chrpos_T genomicleng… in print_sequence() 916 Genome_T genome = NULL, genomealt = NULL; in main() local
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H A D | pairpool.c | 181 char genome, char genomealt, int dynprogindex) { in Pairpool_push() 306 int introntype, char genome, char genomealt, bool extraexonp) { in Pairpool_push_gapalign()
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H A D | splicetrie_build.c | 386 Genome_T genome, Genome_T genomealt, Chrpos_T shortsplicedist, in Splicetrie_retrieve_via_splicesites() 806 Univ_IIT_T chromosome_iit, Genome_T genome, Genome_T genomealt, in Splicetrie_retrieve_via_introns()
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H A D | genome.c | 10510 static T genomealt; variable 10810 Genome_fill_buffer_simple_alt (T genome, T genomealt, Univcoord_T left, Chrpos_T length, char *gbuf… in Genome_fill_buffer_simple_alt()
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H A D | gmap.c | 2485 int queryntlength, Genome_T genome, Genome_T genomealt, in find_breakpoint()
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