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Searched defs:genomealt (Results 1 – 9 of 9) sorted by relevance

/dports/biology/gmap/gmap-2020-09-12/src/
H A Dsimplepair.h25 char genomealt; member
H A Dpairdef.h28 char genomealt; member
H A Dchimera.c814 Stage3_T left_part, Stage3_T right_part, Genome_T genome, Genome_T genomealt, in find_exonexon_fwd()
952 Stage3_T left_part, Stage3_T right_part, Genome_T genome, Genome_T genomealt, in find_exonexon_rev()
1092 Stage3_T left_part, Stage3_T right_part, Genome_T genome, Genome_T genomealt, in Chimera_find_exonexon()
H A Dknownsplicing.c249 Genome_T genome, Genome_T genomealt, Chrpos_T shortsplicedist) { in Knownsplicing_retrieve_via_splicesites()
H A Dget-genome.c231 print_sequence (Genome_T genome, Genome_T genomealt, Univcoord_T genomicstart, Chrpos_T genomicleng… in print_sequence()
916 Genome_T genome = NULL, genomealt = NULL; in main() local
H A Dpairpool.c181 char genome, char genomealt, int dynprogindex) { in Pairpool_push()
306 int introntype, char genome, char genomealt, bool extraexonp) { in Pairpool_push_gapalign()
H A Dsplicetrie_build.c386 Genome_T genome, Genome_T genomealt, Chrpos_T shortsplicedist, in Splicetrie_retrieve_via_splicesites()
806 Univ_IIT_T chromosome_iit, Genome_T genome, Genome_T genomealt, in Splicetrie_retrieve_via_introns()
H A Dgenome.c10510 static T genomealt; variable
10810 Genome_fill_buffer_simple_alt (T genome, T genomealt, Univcoord_T left, Chrpos_T length, char *gbuf… in Genome_fill_buffer_simple_alt()
H A Dgmap.c2485 int queryntlength, Genome_T genome, Genome_T genomealt, in find_breakpoint()