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Searched defs:haps (Results 1 – 25 of 26) sorted by relevance

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/dports/multimedia/v4l_compat/linux-5.13-rc2/drivers/platform/x86/
H A Dtoshiba_haps.c61 struct toshiba_haps_dev *haps = dev_get_drvdata(dev); in protection_level_show() local
70 struct toshiba_haps_dev *haps = dev_get_drvdata(dev); in protection_level_store() local
99 struct toshiba_haps_dev *haps = dev_get_drvdata(dev); in reset_protection_store() local
177 struct toshiba_haps_dev *haps; in toshiba_haps_add() local
214 struct toshiba_haps_dev *haps; in toshiba_haps_suspend() local
227 struct toshiba_haps_dev *haps; in toshiba_haps_resume() local
/dports/multimedia/v4l-utils/linux-5.13-rc2/drivers/platform/x86/
H A Dtoshiba_haps.c61 struct toshiba_haps_dev *haps = dev_get_drvdata(dev); in protection_level_show() local
70 struct toshiba_haps_dev *haps = dev_get_drvdata(dev); in protection_level_store() local
99 struct toshiba_haps_dev *haps = dev_get_drvdata(dev); in reset_protection_store() local
177 struct toshiba_haps_dev *haps; in toshiba_haps_add() local
214 struct toshiba_haps_dev *haps; in toshiba_haps_suspend() local
227 struct toshiba_haps_dev *haps; in toshiba_haps_resume() local
/dports/multimedia/libv4l/linux-5.13-rc2/drivers/platform/x86/
H A Dtoshiba_haps.c61 struct toshiba_haps_dev *haps = dev_get_drvdata(dev); in protection_level_show() local
70 struct toshiba_haps_dev *haps = dev_get_drvdata(dev); in protection_level_store() local
99 struct toshiba_haps_dev *haps = dev_get_drvdata(dev); in reset_protection_store() local
177 struct toshiba_haps_dev *haps; in toshiba_haps_add() local
214 struct toshiba_haps_dev *haps; in toshiba_haps_suspend() local
227 struct toshiba_haps_dev *haps; in toshiba_haps_resume() local
/dports/biology/gatk/gatk-4.2.0.0/src/test/java/org/broadinstitute/hellbender/tools/walkers/haplotypecaller/
H A DHaplotypeSizeAndBaseComparatorUnitTest.java22 final List<Haplotype> haps = new ArrayList<>(seqs.size()); in testComparison() local
/dports/biology/lamarc/lamarc-2.1.8/src/xml/
H A Dtoxml.cpp177 vector<vector<TipData> > haps(biggest+1); in IndividualXML() local
/dports/biology/haplohseq/haplohseq-0.1.2/scripts/
H A Dsimple_phaser.py203 def writeHaps(self, haps, outfile): argument
/dports/biology/vcflib/vcflib-1.0.2/src/
H A Dvcfgeno2haplo.cpp264 vector<vector<int> >& haps = hs->second; in main() local
H A DplotHaps.cpp162 void printHaplotypes(string **haps, vector<int> target, vector<long int> pos){ in printHaplotypes()
H A DVariant.cpp1939 vector<string> haps = split(genotype, splitter); in decomposeGenotype() local
1958 vector<string> haps = split(genotype, splitter); in decomposePhasedGenotype() local
/dports/biology/freebayes/freebayes-1.3.5/vcflib-temp/src/
H A Dvcfgeno2haplo.cpp254 vector<vector<int> >& haps = hs->second; in main() local
H A DplotHaps.cpp154 void printHaplotypes(string **haps, vector<int> target, vector<long int> pos){ in printHaplotypes()
H A DVariant.cpp1930 vector<string> haps = split(genotype, splitter); in decomposeGenotype() local
1949 vector<string> haps = split(genotype, splitter); in decomposePhasedGenotype() local
/dports/biology/freebayes/freebayes-1.3.5/vcflib/src/
H A Dvcfgeno2haplo.cpp254 vector<vector<int> >& haps = hs->second; in main() local
H A DplotHaps.cpp154 void printHaplotypes(string **haps, vector<int> target, vector<long int> pos){ in printHaplotypes()
H A DVariant.cpp1930 vector<string> haps = split(genotype, splitter); in decomposeGenotype() local
1949 vector<string> haps = split(genotype, splitter); in decomposePhasedGenotype() local
/dports/biology/lamarc/lamarc-2.1.8/src/tree/
H A Dindividual.cpp346 void Individual::SetHaplotypes(string lname, long marker, Haplotypes haps) in SetHaplotypes()
H A Dtree.cpp785 vector<Branch_ptr> haps = ind.GetAllTips(); in SwapSiteDLs() local
865 vector<Branch_ptr> haps = m_individuals[ind].GetAllTips(); in ReassignDLsFor() local
H A Drectree.cpp379 vector<Branch_ptr> haps = m_individuals[ind].GetAllTips(); in ReassignDLsFor() local
/dports/biology/stacks/stacks-2.4/src/
H A DHwp.cc400 const vector<char*>& haps = d[i]->obshap; in populate() local
H A DPopSum.cc933 const vector<char*>& haps = d[i]->obshap; in count_haplotypes_at_locus() local
1464 vector<HapStat *> *haps = &this->_haplotypes.back(); in haplotype_divergence_pairwise() local
1525 vector<HapStat *> *haps = &this->_metapop_haplotypes; in haplotype_divergence() local
/dports/biology/gatk/gatk-4.2.0.0/src/test/java/org/broadinstitute/hellbender/utils/haplotype/
H A DHaplotypeBAMWriterUnitTest.java306 final Haplotype[] haps = { in generateHaplotypeList() local
/dports/biology/lamarc/lamarc-2.1.8/src/datalike/
H A Dlocus.cpp553 Haplotypes haps(individuals[ind].GetHaplotypesFor(GetName(),marker), true); in MakePhenotypesFor() local
/dports/biology/lamarc/lamarc-2.1.8/src/convModel/
H A Dgc_datastore_export.cpp256 const std::vector<gcHapProbability> & haps = pheno.GetHapProbabilities(); in AddGenoResolutionElem() local
/dports/biology/emboss/EMBOSS-6.6.0/ajax/ensembl/
H A Densslice.c6428 AjPList haps = NULL; in ensSliceadaptorRetrieveNormalisedprojection() local
H A Densfeature.c1394 AjPList haps = NULL; in ensFeatureFetchAllAlternativelocations() local

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