/dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/src/algo/blast/unit_tests/api/ |
H A D | scoreblk_unit_test.cpp | 65 const EBlastProgramType kProgram = eBlastTypeBlastn; in BOOST_AUTO_TEST_CASE() local 110 const EBlastProgramType kProgram = eBlastTypeBlastp; in BOOST_AUTO_TEST_CASE() local 152 const EBlastProgramType kProgram = eBlastTypePhiBlastp; in BOOST_AUTO_TEST_CASE() local 235 const EBlastProgramType kProgram = eBlastTypeBlastp; in BOOST_AUTO_TEST_CASE() local 348 const EBlastProgramType kProgram = eBlastTypeBlastn; in BOOST_AUTO_TEST_CASE() local 365 const EBlastProgramType kProgram = eBlastTypeBlastn; in BOOST_AUTO_TEST_CASE() local
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H A D | hspstream_unit_test.cpp | 68 const EBlastProgramType kProgram = eBlastTypeBlastp; in testHSPStream() local 183 const EBlastProgramType kProgram = eBlastTypeBlastp; in BOOST_AUTO_TEST_CASE() local
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H A D | redoalignment_unit_test.cpp | 448 const EBlastProgramType kProgram = eBlastTypeBlastp; in BOOST_FIXTURE_TEST_SUITE() local 508 const EBlastProgramType kProgram = eBlastTypeBlastp; in BOOST_AUTO_TEST_CASE() local 568 const EBlastProgramType kProgram = eBlastTypePsiBlast; in BOOST_AUTO_TEST_CASE() local 631 const EBlastProgramType kProgram = eBlastTypeBlastp; in BOOST_AUTO_TEST_CASE() local 705 const EBlastProgramType kProgram = eBlastTypeBlastp; in BOOST_AUTO_TEST_CASE() local 765 const EBlastProgramType kProgram = eBlastTypeBlastp; in BOOST_AUTO_TEST_CASE() local 821 const EBlastProgramType kProgram = eBlastTypePsiBlast; in BOOST_AUTO_TEST_CASE() local 904 const EBlastProgramType kProgram = eBlastTypeBlastp; in BOOST_AUTO_TEST_CASE() local
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/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/algo/blast/unit_tests/api/ |
H A D | scoreblk_unit_test.cpp | 65 const EBlastProgramType kProgram = eBlastTypeBlastn; in BOOST_AUTO_TEST_CASE() local 110 const EBlastProgramType kProgram = eBlastTypeBlastp; in BOOST_AUTO_TEST_CASE() local 152 const EBlastProgramType kProgram = eBlastTypePhiBlastp; in BOOST_AUTO_TEST_CASE() local 235 const EBlastProgramType kProgram = eBlastTypeBlastp; in BOOST_AUTO_TEST_CASE() local 348 const EBlastProgramType kProgram = eBlastTypeBlastn; in BOOST_AUTO_TEST_CASE() local 365 const EBlastProgramType kProgram = eBlastTypeBlastn; in BOOST_AUTO_TEST_CASE() local
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H A D | hspstream_unit_test.cpp | 68 const EBlastProgramType kProgram = eBlastTypeBlastp; in testHSPStream() local 183 const EBlastProgramType kProgram = eBlastTypeBlastp; in BOOST_AUTO_TEST_CASE() local
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H A D | redoalignment_unit_test.cpp | 448 const EBlastProgramType kProgram = eBlastTypeBlastp; in BOOST_FIXTURE_TEST_SUITE() local 508 const EBlastProgramType kProgram = eBlastTypeBlastp; in BOOST_AUTO_TEST_CASE() local 568 const EBlastProgramType kProgram = eBlastTypePsiBlast; in BOOST_AUTO_TEST_CASE() local 631 const EBlastProgramType kProgram = eBlastTypeBlastp; in BOOST_AUTO_TEST_CASE() local 705 const EBlastProgramType kProgram = eBlastTypeBlastp; in BOOST_AUTO_TEST_CASE() local 765 const EBlastProgramType kProgram = eBlastTypeBlastp; in BOOST_AUTO_TEST_CASE() local 821 const EBlastProgramType kProgram = eBlastTypePsiBlast; in BOOST_AUTO_TEST_CASE() local 904 const EBlastProgramType kProgram = eBlastTypeBlastp; in BOOST_AUTO_TEST_CASE() local
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/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/algo/blast/blastinput/ |
H A D | kblastp_args.cpp | 47 static const string kProgram("kblastp"); in CKBlastpAppArgs() local
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H A D | tblastx_args.cpp | 47 static const string kProgram("tblastx"); in CTblastxAppArgs() local
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H A D | deltablast_args.cpp | 45 static const string kProgram("deltablast"); in CDeltaBlastAppArgs() local
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H A D | igblastn_args.cpp | 62 static const string kProgram("igblastn"); in CIgBlastnAppArgs() local
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H A D | igblastp_args.cpp | 63 static const string kProgram("igblastp"); in CIgBlastpAppArgs() local
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H A D | blastn_args.cpp | 48 static const char kProgram[] = "blastn"; in CBlastnAppArgs() local
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H A D | blastx_args.cpp | 47 static const string kProgram("blastx"); in CBlastxAppArgs() local
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H A D | psiblast_args.cpp | 48 static const string kProgram("psiblast"); in CPsiBlastAppArgs() local
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/dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/src/algo/blast/blastinput/ |
H A D | kblastp_args.cpp | 47 static const string kProgram("kblastp"); in CKBlastpAppArgs() local
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H A D | tblastx_args.cpp | 47 static const string kProgram("tblastx"); in CTblastxAppArgs() local
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H A D | deltablast_args.cpp | 45 static const string kProgram("deltablast"); in CDeltaBlastAppArgs() local
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H A D | igblastn_args.cpp | 62 static const string kProgram("igblastn"); in CIgBlastnAppArgs() local
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H A D | igblastp_args.cpp | 63 static const string kProgram("igblastp"); in CIgBlastpAppArgs() local
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H A D | blastn_args.cpp | 48 static const char kProgram[] = "blastn"; in CBlastnAppArgs() local
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H A D | blastx_args.cpp | 47 static const string kProgram("blastx"); in CBlastxAppArgs() local
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H A D | blastp_args.cpp | 47 static const string kProgram("blastp"); in CBlastpAppArgs() local
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H A D | psiblast_args.cpp | 48 static const string kProgram("psiblast"); in CPsiBlastAppArgs() local
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/dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/src/algo/blast/api/ |
H A D | split_query_cxx.cpp | 217 const EBlastProgramType kProgram = m_Options->GetProgramType(); in x_ComputeQueryIndicesForChunks() local 341 const EBlastProgramType kProgram = m_Options->GetProgramType(); in x_ComputeQueryContextsForChunks() local 584 const EBlastProgramType kProgram = m_Options->GetProgramType(); in x_ComputeContextOffsets_NonTranslatedQueries() local 690 const EBlastProgramType kProgram = m_Options->GetProgramType(); in x_ComputeContextOffsets_TranslatedQueries() local
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/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/algo/blast/api/ |
H A D | split_query_cxx.cpp | 217 const EBlastProgramType kProgram = m_Options->GetProgramType(); in x_ComputeQueryIndicesForChunks() local 341 const EBlastProgramType kProgram = m_Options->GetProgramType(); in x_ComputeQueryContextsForChunks() local 584 const EBlastProgramType kProgram = m_Options->GetProgramType(); in x_ComputeContextOffsets_NonTranslatedQueries() local 690 const EBlastProgramType kProgram = m_Options->GetProgramType(); in x_ComputeContextOffsets_TranslatedQueries() local
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