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Searched defs:kProgram (Results 1 – 25 of 67) sorted by relevance

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/dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/src/algo/blast/unit_tests/api/
H A Dscoreblk_unit_test.cpp65 const EBlastProgramType kProgram = eBlastTypeBlastn; in BOOST_AUTO_TEST_CASE() local
110 const EBlastProgramType kProgram = eBlastTypeBlastp; in BOOST_AUTO_TEST_CASE() local
152 const EBlastProgramType kProgram = eBlastTypePhiBlastp; in BOOST_AUTO_TEST_CASE() local
235 const EBlastProgramType kProgram = eBlastTypeBlastp; in BOOST_AUTO_TEST_CASE() local
348 const EBlastProgramType kProgram = eBlastTypeBlastn; in BOOST_AUTO_TEST_CASE() local
365 const EBlastProgramType kProgram = eBlastTypeBlastn; in BOOST_AUTO_TEST_CASE() local
H A Dhspstream_unit_test.cpp68 const EBlastProgramType kProgram = eBlastTypeBlastp; in testHSPStream() local
183 const EBlastProgramType kProgram = eBlastTypeBlastp; in BOOST_AUTO_TEST_CASE() local
H A Dredoalignment_unit_test.cpp448 const EBlastProgramType kProgram = eBlastTypeBlastp; in BOOST_FIXTURE_TEST_SUITE() local
508 const EBlastProgramType kProgram = eBlastTypeBlastp; in BOOST_AUTO_TEST_CASE() local
568 const EBlastProgramType kProgram = eBlastTypePsiBlast; in BOOST_AUTO_TEST_CASE() local
631 const EBlastProgramType kProgram = eBlastTypeBlastp; in BOOST_AUTO_TEST_CASE() local
705 const EBlastProgramType kProgram = eBlastTypeBlastp; in BOOST_AUTO_TEST_CASE() local
765 const EBlastProgramType kProgram = eBlastTypeBlastp; in BOOST_AUTO_TEST_CASE() local
821 const EBlastProgramType kProgram = eBlastTypePsiBlast; in BOOST_AUTO_TEST_CASE() local
904 const EBlastProgramType kProgram = eBlastTypeBlastp; in BOOST_AUTO_TEST_CASE() local
/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/algo/blast/unit_tests/api/
H A Dscoreblk_unit_test.cpp65 const EBlastProgramType kProgram = eBlastTypeBlastn; in BOOST_AUTO_TEST_CASE() local
110 const EBlastProgramType kProgram = eBlastTypeBlastp; in BOOST_AUTO_TEST_CASE() local
152 const EBlastProgramType kProgram = eBlastTypePhiBlastp; in BOOST_AUTO_TEST_CASE() local
235 const EBlastProgramType kProgram = eBlastTypeBlastp; in BOOST_AUTO_TEST_CASE() local
348 const EBlastProgramType kProgram = eBlastTypeBlastn; in BOOST_AUTO_TEST_CASE() local
365 const EBlastProgramType kProgram = eBlastTypeBlastn; in BOOST_AUTO_TEST_CASE() local
H A Dhspstream_unit_test.cpp68 const EBlastProgramType kProgram = eBlastTypeBlastp; in testHSPStream() local
183 const EBlastProgramType kProgram = eBlastTypeBlastp; in BOOST_AUTO_TEST_CASE() local
H A Dredoalignment_unit_test.cpp448 const EBlastProgramType kProgram = eBlastTypeBlastp; in BOOST_FIXTURE_TEST_SUITE() local
508 const EBlastProgramType kProgram = eBlastTypeBlastp; in BOOST_AUTO_TEST_CASE() local
568 const EBlastProgramType kProgram = eBlastTypePsiBlast; in BOOST_AUTO_TEST_CASE() local
631 const EBlastProgramType kProgram = eBlastTypeBlastp; in BOOST_AUTO_TEST_CASE() local
705 const EBlastProgramType kProgram = eBlastTypeBlastp; in BOOST_AUTO_TEST_CASE() local
765 const EBlastProgramType kProgram = eBlastTypeBlastp; in BOOST_AUTO_TEST_CASE() local
821 const EBlastProgramType kProgram = eBlastTypePsiBlast; in BOOST_AUTO_TEST_CASE() local
904 const EBlastProgramType kProgram = eBlastTypeBlastp; in BOOST_AUTO_TEST_CASE() local
/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/algo/blast/blastinput/
H A Dkblastp_args.cpp47 static const string kProgram("kblastp"); in CKBlastpAppArgs() local
H A Dtblastx_args.cpp47 static const string kProgram("tblastx"); in CTblastxAppArgs() local
H A Ddeltablast_args.cpp45 static const string kProgram("deltablast"); in CDeltaBlastAppArgs() local
H A Digblastn_args.cpp62 static const string kProgram("igblastn"); in CIgBlastnAppArgs() local
H A Digblastp_args.cpp63 static const string kProgram("igblastp"); in CIgBlastpAppArgs() local
H A Dblastn_args.cpp48 static const char kProgram[] = "blastn"; in CBlastnAppArgs() local
H A Dblastx_args.cpp47 static const string kProgram("blastx"); in CBlastxAppArgs() local
H A Dpsiblast_args.cpp48 static const string kProgram("psiblast"); in CPsiBlastAppArgs() local
/dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/src/algo/blast/blastinput/
H A Dkblastp_args.cpp47 static const string kProgram("kblastp"); in CKBlastpAppArgs() local
H A Dtblastx_args.cpp47 static const string kProgram("tblastx"); in CTblastxAppArgs() local
H A Ddeltablast_args.cpp45 static const string kProgram("deltablast"); in CDeltaBlastAppArgs() local
H A Digblastn_args.cpp62 static const string kProgram("igblastn"); in CIgBlastnAppArgs() local
H A Digblastp_args.cpp63 static const string kProgram("igblastp"); in CIgBlastpAppArgs() local
H A Dblastn_args.cpp48 static const char kProgram[] = "blastn"; in CBlastnAppArgs() local
H A Dblastx_args.cpp47 static const string kProgram("blastx"); in CBlastxAppArgs() local
H A Dblastp_args.cpp47 static const string kProgram("blastp"); in CBlastpAppArgs() local
H A Dpsiblast_args.cpp48 static const string kProgram("psiblast"); in CPsiBlastAppArgs() local
/dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/src/algo/blast/api/
H A Dsplit_query_cxx.cpp217 const EBlastProgramType kProgram = m_Options->GetProgramType(); in x_ComputeQueryIndicesForChunks() local
341 const EBlastProgramType kProgram = m_Options->GetProgramType(); in x_ComputeQueryContextsForChunks() local
584 const EBlastProgramType kProgram = m_Options->GetProgramType(); in x_ComputeContextOffsets_NonTranslatedQueries() local
690 const EBlastProgramType kProgram = m_Options->GetProgramType(); in x_ComputeContextOffsets_TranslatedQueries() local
/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/algo/blast/api/
H A Dsplit_query_cxx.cpp217 const EBlastProgramType kProgram = m_Options->GetProgramType(); in x_ComputeQueryIndicesForChunks() local
341 const EBlastProgramType kProgram = m_Options->GetProgramType(); in x_ComputeQueryContextsForChunks() local
584 const EBlastProgramType kProgram = m_Options->GetProgramType(); in x_ComputeContextOffsets_NonTranslatedQueries() local
690 const EBlastProgramType kProgram = m_Options->GetProgramType(); in x_ComputeContextOffsets_TranslatedQueries() local

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