api - OpenGrok cross reference for /dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/src/algo/blast/api/

Name		Date	Size	#Lines	LOC
..		03-May-2022	-
Makefile.in	H A D	28-May-2009	218	14	3
Makefile.xblast.lib.msvc	H A D	30-Jul-2007	49	3	2
Makefile.xblast.lib.unix	H A D	26-Apr-2013	544	16	12
bioseq_extract_data_priv.cpp	H A D	17-Oct-2016	14.1 KiB	458	331
bioseq_extract_data_priv.hpp	H A D	17-Oct-2016	7.4 KiB	207	61
bl2seq.cpp	H A D	02-Feb-2017	7 KiB	239	167
blast_advprot_options.cpp	H A D	03-Nov-2008	2.3 KiB	75	26
blast_aux.cpp	H A D	04-Jun-2020	35.8 KiB	1,200	959
blast_aux_priv.cpp	H A D	19-May-2021	17.2 KiB	481	343
blast_aux_priv.hpp	H A D	08-Oct-2020	6.6 KiB	178	83
blast_dbindex.cpp	H A D	23-May-2017	40.6 KiB	1,187	678
blast_memento_priv.hpp	H A D	08-Nov-2007	5.7 KiB	155	79
blast_mtlock.cpp	H A D	04-May-2016	2.4 KiB	82	36
blast_node.cpp	H A D	19-May-2021	9.1 KiB	324	268
blast_nucl_options.cpp	H A D	09-Nov-2018	8.2 KiB	289	196
blast_objmgr_priv.hpp	H A D	17-Oct-2016	12.8 KiB	316	94
blast_objmgr_tools.cpp	H A D	19-May-2021	18.9 KiB	618	467
blast_options_builder.cpp	H A D	06-Oct-2020	26.3 KiB	815	662
blast_options_cxx.cpp	H A D	27-Jun-2019	61.5 KiB	2,729	2,256
blast_options_handle.cpp	H A D	09-May-2017	16 KiB	493	404
blast_options_local_priv.cpp	H A D	09-Oct-2020	19.2 KiB	572	454
blast_options_local_priv.hpp	H A D	09-Jul-2018	46.5 KiB	1,865	1,362
blast_prot_options.cpp	H A D	12-Jan-2015	3.9 KiB	138	75
blast_results.cpp	H A D	23-Oct-2018	18.2 KiB	627	492
blast_rps_options.cpp	H A D	12-Jan-2015	3.9 KiB	141	75
blast_seqalign.cpp	H A D	13-Feb-2019	77.9 KiB	2,147	1,483
blast_seqalign.hpp	H A D	05-Apr-2017	6.4 KiB	172	58
blast_seqinfosrc_aux.cpp	H A D	14-Nov-2019	4.5 KiB	156	97
blast_setup.hpp	H A D	17-Oct-2016	21 KiB	539	194
blast_setup_cxx.cpp	H A D	19-May-2021	60.2 KiB	1,776	1,332
blast_usage_report.cpp	H A D	01-Apr-2021	7.5 KiB	230	179
blastp_kmer_options.cpp	H A D	09-May-2017	1.8 KiB	60	15
blastx_options.cpp	H A D	10-Jul-2012	2.8 KiB	97	46
cdd_pssm_input.cpp	H A D	04-May-2016	26.4 KiB	895	566
deltablast.cpp	H A D	04-May-2016	8 KiB	239	147
deltablast_options.cpp	H A D	14-Dec-2011	2.4 KiB	80	32
disc_nucl_options.cpp	H A D	07-Jan-2008	3.1 KiB	104	54
dust_filter.cpp	H A D	04-May-2016	6.6 KiB	193	123
dust_filter.hpp	H A D	04-May-2007	3.6 KiB	97	27
effsearchspace_calc.cpp	H A D	19-May-2021	5.4 KiB	156	87
local_blast.cpp	H A D	19-May-2021	11.3 KiB	311	216
local_db_adapter.cpp	H A D	04-May-2016	6.9 KiB	206	146
local_search.cpp	H A D	04-May-2016	4.7 KiB	180	94
magicblast.cpp	H A D	14-Nov-2019	24 KiB	718	520
magicblast_options.cpp	H A D	04-Jan-2019	6.4 KiB	236	153
msa_pssm_input.cpp	H A D	29-Jul-2016	13 KiB	403	287
objmgr_query_data.cpp	H A D	09-Jan-2019	14.7 KiB	503	337
objmgrfree_query_data.cpp	H A D	04-May-2016	8.5 KiB	295	180
phiblast_nucl_options.cpp	H A D	04-May-2007	1.8 KiB	58	13
phiblast_prot_options.cpp	H A D	04-May-2007	1.8 KiB	58	13
prelim_search_runner.hpp	H A D	27-Sep-2016	5.9 KiB	154	85
prelim_stage.cpp	H A D	13-May-2019	16.3 KiB	456	331
psi_pssm_input.cpp	H A D	04-May-2016	14.5 KiB	459	303
psibl2seq.cpp	H A D	04-May-2016	3.1 KiB	102	54
psiblast.cpp	H A D	04-May-2016	5.2 KiB	158	98
psiblast_aux_priv.cpp	H A D	19-May-2021	24.7 KiB	675	536
psiblast_aux_priv.hpp	H A D	27-May-2009	6.2 KiB	169	55
psiblast_impl.cpp	H A D	04-May-2016	6.4 KiB	198	130
psiblast_impl.hpp	H A D	04-May-2007	4.8 KiB	143	41
psiblast_iteration.cpp	H A D	04-May-2016	4.4 KiB	148	84
psiblast_options.cpp	H A D	01-Apr-2014	2.4 KiB	82	34
pssm_engine.cpp	H A D	04-May-2016	25.7 KiB	795	602
query_data.cpp	H A D	04-May-2016	3.9 KiB	157	93
remote_blast.cpp	H A D	19-May-2021	78.5 KiB	2,700	2,021
remote_search.cpp	H A D	04-May-2016	11.2 KiB	370	201
repeats_filter_cxx.cpp	H A D	04-May-2016	14.4 KiB	406	211
rps_aux.cpp	H A D	19-May-2021	20.3 KiB	648	379
rpsblast_local.cpp	H A D	06-Oct-2014	12.2 KiB	457	339
rpstblastn_options.cpp	H A D	23-Jun-2016	2 KiB	71	23
search_strategy.cpp	H A D	19-May-2021	23 KiB	761	587
seedtop.cpp	H A D	09-May-2017	8.2 KiB	233	161
seqinfosrc_bioseq.cpp	H A D	04-May-2016	3.4 KiB	111	57
seqinfosrc_bioseq.hpp	H A D	27-Apr-2016	5.1 KiB	128	33
seqinfosrc_seqdb.cpp	H A D	22-May-2017	4.3 KiB	145	88
seqinfosrc_seqvec.cpp	H A D	04-May-2016	5.2 KiB	169	108
seqsrc_multiseq.cpp	H A D	14-Oct-2015	18.2 KiB	578	372
seqsrc_query_factory.cpp	H A D	26-Jan-2012	19.7 KiB	582	380
seqsrc_query_factory.hpp	H A D	28-Jun-2011	2.6 KiB	72	17
seqsrc_seqdb.cpp	H A D	02-Apr-2020	26.2 KiB	799	511
setup_factory.cpp	H A D	09-Jul-2018	17.7 KiB	492	379
split_query.hpp	H A D	27-May-2009	5.7 KiB	162	52
split_query_aux_priv.cpp	H A D	20-Mar-2017	13.5 KiB	408	296
split_query_aux_priv.hpp	H A D	20-Mar-2017	10 KiB	278	82
split_query_blk.cpp	H A D	04-May-2016	7.6 KiB	247	186
split_query_blk.hpp	H A D	25-Jun-2010	5.4 KiB	134	34
split_query_cxx.cpp	H A D	31-Oct-2019	35.8 KiB	911	617
subj_ranges_set.cpp	H A D	03-Feb-2009	5.9 KiB	172	77
tblastn_options.cpp	H A D	03-Nov-2008	2.6 KiB	92	42
tblastx_options.cpp	H A D	04-May-2007	2.9 KiB	102	51
traceback_stage.cpp	H A D	31-Oct-2018	14.5 KiB	365	266
uniform_search.cpp	H A D	10-Feb-2020	9 KiB	326	250
version.cpp	H A D	15-Sep-2015	5 KiB	138	72
winmask_filter.cpp	H A D	04-May-2016	15.9 KiB	484	338
winmask_filter.hpp	H A D	08-Jul-2008	4.5 KiB	129	38