/dports/biology/mapm3/mapm3-3.0_1/mapm/ |
H A D | two_cmds.c | 77 int *loci=NULL, num_loci, *linkage_group=NULL, group_size, num_left; in group() local 145 int *loci=NULL, num_loci, num_left, *linkage_group=NULL, group_size; in haplotype() local 241 int *loci=NULL, num_loci, *changed=NULL, num_changed; in unhaplotype() local 321 int a, b, n, num_loci, *loci=NULL; in biglods() local 424 int *loci=NULL, num_loci, type, source; in lodtable() local 455 int i, j, a, b, num_trials, *try_me=NULL, num_loci, *loci=NULL; in pairwise() local 639 int i, num_loci, *loci=NULL, num_trips, num_groups, num_links; in three_point() local 770 int *loci=NULL, num_loci, *linkage_group=NULL, group_size, groups_done; in suggest_subset() local
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H A D | toplevel.h | 212 #define sort_loci(loci,num_loci) inv_isort(loci,num_loci) argument 254 #define for_all_3pt_seqs(loci,num,seq) \ argument
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/dports/biology/star/STAR-2.7.9a/source/ |
H A D | Variation.h | 19 uint* loci; //snp coordinates variable
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/dports/biology/stacks/stacks-2.4/src/ |
H A D | export_formats.cc | 218 SumstatsExport::write_batch(const vector<LocBin *> &loci) in write_batch() 341 HapstatsExport::write_batch(const vector<LocBin *> &loci) in write_batch() 865 GenotypesExport::write_batch(const vector<LocBin *> &loci) in write_batch() 945 MarkersExport::write_batch(const vector<LocBin *> &loci) in write_batch() 1013 FastaLociExport::write_batch(const vector<LocBin *> &loci) in write_batch() 1068 FastaRawExport::write_batch(const vector<LocBin *> &loci) in write_batch() 1145 FastaSamplesExport::write_batch(const vector<LocBin *> &loci) in write_batch() 1217 OrderableExport::write_batch(const vector<LocBin*> &loci) in write_batch() 1454 GenePopHapsExport::write_batch(const vector<LocBin*>& loci) in write_batch() 2374 int VcfHapsExport::write_batch(const vector<LocBin*>& loci){ in write_batch() [all …]
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/dports/math/vtk6/VTK-6.2.0/Common/Core/ |
H A D | vtkVariantArray.cxx | 188 vtkIdType loci = i * this->NumberOfComponents; in SetTuple() local 198 vtkIdType loci = i * this->NumberOfComponents; in SetTuple() local 213 vtkIdType loci = i * this->NumberOfComponents; in SetTuple() local 233 vtkIdType loci = i * this->NumberOfComponents; in InsertTuple() local 243 vtkIdType loci = i * this->NumberOfComponents; in InsertTuple() local 255 vtkIdType loci = i * this->NumberOfComponents; in InsertTuple() local
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/dports/math/vtk9/VTK-9.1.0/Common/Core/ |
H A D | vtkVariantArray.cxx | 194 vtkIdType loci = i * this->NumberOfComponents; in SetTuple() local 204 vtkIdType loci = i * this->NumberOfComponents; in SetTuple() local 219 vtkIdType loci = i * this->NumberOfComponents; in SetTuple() local 239 vtkIdType loci = i * this->NumberOfComponents; in InsertTuple() local 249 vtkIdType loci = i * this->NumberOfComponents; in InsertTuple() local 261 vtkIdType loci = i * this->NumberOfComponents; in InsertTuple() local
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/dports/math/vtk8/VTK-8.2.0/Common/Core/ |
H A D | vtkVariantArray.cxx | 194 vtkIdType loci = i * this->NumberOfComponents; in SetTuple() local 204 vtkIdType loci = i * this->NumberOfComponents; in SetTuple() local 219 vtkIdType loci = i * this->NumberOfComponents; in SetTuple() local 239 vtkIdType loci = i * this->NumberOfComponents; in InsertTuple() local 249 vtkIdType loci = i * this->NumberOfComponents; in InsertTuple() local 261 vtkIdType loci = i * this->NumberOfComponents; in InsertTuple() local
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/dports/science/rdkit/rdkit-Release_2021_03_5/Code/GraphMol/Depictor/ |
H A D | testDepictor.cpp | 140 RDGeom::Point3D loci = conf.getAtomPos(i); in testCollisions() local 385 RDGeom::Point3D loci = conf.getAtomPos(i); in testIssue248() local 417 RDGeom::Point3D loci = conf.getAtomPos(i); in testQueries() local 502 RDGeom::Point3D loci = conf.getAtomPos(i); in testIssue2821647() local 516 RDGeom::Point3D loci = conf.getAtomPos(i); in testIssue2821647() local 530 RDGeom::Point3D loci = conf.getAtomPos(i); in testIssue2821647() local 544 RDGeom::Point3D loci = conf.getAtomPos(i); in testIssue2821647() local 573 RDGeom::Point3D loci = conf.getAtomPos(i); in testIssue2995724() local 594 RDGeom::Point3D loci = conf.getAtomPos(i); in testIssue2995724() local
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/dports/net/vnstat/vnstat-2.8/src/ |
H A D | cfg.h | 7 int32_t *loci; member
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/dports/devel/zpu-binutils/zpu-toolchain-1.0/toolchain/gdb/gdb/testsuite/gdb.trace/ |
H A D | collection.c | 90 int loci = 12; in local_test_func() local 115 register int loci = 12; in reglocal_test_func() local 140 static int loci; in statlocal_test_func() local
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/dports/devel/zpu-gcc/zpu-toolchain-1.0/toolchain/gdb/gdb/testsuite/gdb.trace/ |
H A D | collection.c | 90 int loci = 12; in local_test_func() local 115 register int loci = 12; in reglocal_test_func() local 140 static int loci; in statlocal_test_func() local
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/dports/devel/avr-gdb/gdb-7.3.1/gdb/testsuite/gdb.trace/ |
H A D | collection.c | 100 int loci = 12; in local_test_func() local 126 register int loci = 12; in reglocal_test_func() local 151 static int loci; in statlocal_test_func() local
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H A D | unavailable.cc | 212 int loci = 12; in local_test_func() local 241 register int loci = 12; in reglocal_test_func() local 269 static int loci; in statlocal_test_func() local
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/dports/editors/texmacs/TeXmacs-1.99.4-src/src/Data/Observers/ |
H A D | link.hpp | 56 list<observer> loci; member in link_repository_rep
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/dports/devel/gdb761/gdb-7.6.1/gdb/testsuite/gdb.trace/ |
H A D | collection.c | 100 int loci = 12; in local_test_func() local 126 register int loci = 12; in reglocal_test_func() local 151 static int loci; in statlocal_test_func() local
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H A D | unavailable.cc | 211 int loci = 12; in local_test_func() local 240 register int loci = 12; in reglocal_test_func() local 268 static int loci; in statlocal_test_func() local
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/dports/devel/gdb/gdb-11.1/gdb/testsuite/gdb.trace/ |
H A D | collection.c | 117 int loci = 12; in local_test_func() local 143 register int loci = 12; in reglocal_test_func() local 168 static int loci; in statlocal_test_func() local
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H A D | unavailable.cc | 211 int loci = 12; in local_test_func() local 240 register int loci = 12; in reglocal_test_func() local 268 static int loci; in statlocal_test_func() local
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/dports/biology/gatk/gatk-4.2.0.0/src/test/java/org/broadinstitute/hellbender/tools/dragstr/ |
H A D | DragstrLocusUnitTest.java | 40 final List<DragstrLocus> loci = randomLoci(); in testWriteRead() local
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/dports/biology/lamarc/lamarc-2.1.8/src/convModel/ |
H A D | gc_structures.cpp | 186 gcIdVec loci = GetLocusIdsForRegionByCreation(regionId); in IsBlessedRegion() local 459 const GCLocusInfoMap & loci = region.GetLocusInfoMap(); in GetDisplayableLociFor() local 1682 const GCLocusInfoMap & loci = region.GetLocusInfoMap(); in GetLocusDisplayIndexOf() local 1710 const GCLocusInfoMap & loci = region.GetLocusInfoMap(); in RegionHasAnyLinkedLoci() local 1727 const GCLocusInfoMap & loci = region.GetLocusInfoMap(); in RegionHasAnyUnLinkedLoci() local 1744 gcIdVec loci = GetLocusIdsForRegionByCreation(regionId); in FragmentRegion() local 2157 const GCLocusInfoMap & loci = region.GetLocusInfoMap(); in GetLocusIdsForRegionByCreation() local 2175 const GCLocusInfoMap & loci = region.GetLocusInfoMap(); in GetLocusIdsForRegionByMapPosition() local 2305 GCStructures::RemoveLoci(objVector loci) in RemoveLoci() 2619 constObjVector loci = in VerifyLocusSeparations() local [all …]
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/dports/cad/netgen/netgen-6.2.2105/libsrc/meshing/ |
H A D | smoothing2.5.cpp | 67 int loci; in ImproveVolumeMesh() local
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/dports/devel/gdb/gdb-11.1/gdb/python/lib/gdb/command/ |
H A D | xmethods.py | 86 def get_method_matchers_in_loci(loci, locus_re, matcher_re): argument
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/dports/biology/ugene/ugene-40.1/src/plugins/external_tool_support/src/spidey/ |
H A D | SpideySupportTask.cpp | 121 QList<QByteArray> loci = loc.split('-'); in onSubTaskFinished() local
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/dports/cad/gmsh/gmsh-4.9.2-source/contrib/Netgen/libsrc/meshing/ |
H A D | smoothing2.5.cpp | 66 int loci; in ImproveVolumeMesh() local
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/dports/science/elmerfem/elmerfem-release-9.0/ElmerGUI/netgen/libsrc/meshing/ |
H A D | smoothing2.5.cpp | 66 int loci; in ImproveVolumeMesh() local
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